Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_C04
(647 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 27 0.68
EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein. 26 1.2
EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein. 25 1.6
EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein. 25 1.6
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 8.3
EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein. 23 8.3
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.6 bits (56), Expect = 0.68
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 108 KLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWR 266
KL+ E+ + ++ + K RN+ N VE R+ S+ Y V+ SWR
Sbjct: 702 KLSLAPEKTELLMISSKRSGYRNIPVNICGVEVRSKRSIRYLGVMLHDHLSWR 754
Score = 24.6 bits (51), Expect = 2.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 164 SITQRVRQ*ADSGGEEPAVGRLQERDRR 247
S Q ++Q D+G ++GR RDRR
Sbjct: 544 STLQAIQQVVDAGRRALSLGRTNNRDRR 571
>EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506
>EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.4 bits (53), Expect = 1.6
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELLVREQNLAS 506
>EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.4 bits (53), Expect = 1.6
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 221
+ +LAE+ R ++ EA VAS N + EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELLVREQNLAS 506
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.0 bits (47), Expect = 8.3
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 282 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDIL 386
E+KEE K E+KL + + RD+ + +L
Sbjct: 154 EEKEEAKRREEKLEAQMEKLAAAHQRDRDVLNSLL 188
>EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein.
Length = 503
Score = 23.0 bits (47), Expect = 8.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 102 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERN 212
+ +LAE+ R ++ EA VAS N + EL V E+N
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQN 503
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,349
Number of Sequences: 2352
Number of extensions: 10610
Number of successful extensions: 47
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -