SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0029
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding pr...    26   0.95 
AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding pr...    26   0.95 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.2  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   2.2  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            25   2.9  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    24   5.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   8.8  

>AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding
           protein AgamOBP7 protein.
          Length = 154

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 53  DSKNSEVVKKEIDAVLPTDVKVTTEHITKE--QIVSP 157
           D     ++   +  ++P DVK   +H+T+E   IV+P
Sbjct: 88  DEATGRILLDRLLYIIPDDVKAAVDHLTRECSHIVTP 124


>AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 53  DSKNSEVVKKEIDAVLPTDVKVTTEHITKE--QIVSP 157
           D     ++   +  ++P DVK   +H+T+E   IV+P
Sbjct: 88  DEATGRILLDRLLYIIPDDVKAAVDHLTRECSHIVTP 124


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +2

Query: 320  TDSSSLSHYVDLPKSPLADSPKPTEE 397
            TDS   S     PK+P ADS KP  E
Sbjct: 1334 TDSPLFSRRNRQPKAPDADSSKPQSE 1359


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +2

Query: 14  KPKVQLDLTVQEFDSKNSEVVKKEIDAVLPTDVKVTTEHITKEQIVSPVIEKESRIENKA 193
           KP+  +D   Q       E+ +   + V P D     EH+ +EQ      ++E   E+++
Sbjct: 42  KPEAPVDDAEQPLPPNGDELPEDAPEPV-PEDGSPDEEHLEEEQEEEAEADEEEADESES 100

Query: 194 EE 199
           EE
Sbjct: 101 EE 102


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 115 SNYRTHYKRTNCIS 156
           SN R+HYKR  C S
Sbjct: 170 SNQRSHYKRIQCYS 183


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 323 DSSSLSHYVDLPKSPLADSPKPTEELLE 406
           D  ++     LP  P ADS KPT++ ++
Sbjct: 27  DEENVVQAEQLPILPTADSSKPTDDTVK 54


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 17  PKVQLDLTVQEFDSKNSEVV 76
           P V  DLTV+E+  K +E+V
Sbjct: 91  PPVGSDLTVEEYKRKWTEIV 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,475
Number of Sequences: 2352
Number of extensions: 7516
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -