Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0007
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.8  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.8  
U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    24   3.7  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   3.7  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   6.5  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 TCCKCNSINSQISNRFHH 431
           T  +C S   +++NR+HH
Sbjct: 525 TAWRCRSCGKEVTNRWHH 542


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 TCCKCNSINSQISNRFHH 431
           T  +C S   +++NR+HH
Sbjct: 501 TAWRCRSCGKEVTNRWHH 518


>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 535 RSKSWNSKWFLGHQIFIGYWWHYRSILHP 621
           R KS   KWF+ H+I +  W      L+P
Sbjct: 59  RVKSGVKKWFVDHKIDVMNWTAQSPDLNP 87


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 479  TCLFFLLMALIMIGVKSSKD 538
            T + F LM ++MIGV+ S D
Sbjct: 1006 TSILFPLMLVVMIGVRKSLD 1025


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 235 QHSEQAVLPQQHASCAAEQRPNT 167
           QHS+Q   PQQ  S    Q+P T
Sbjct: 135 QHSQQQQSPQQQQSSQQLQQPLT 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,123
Number of Sequences: 2352
Number of extensions: 15567
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)