Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021029X
         (361 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.49 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   0.65 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.1  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   2.0  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   2.0  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   2.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   3.5  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   4.6  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    22   6.1  

>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 117 LEEATNSAIIRLDLATVAVDLEDLEDLVGKKDSLE 221
           L+E   S +  LDL    +D  +L +L    DSLE
Sbjct: 145 LDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -3

Query: 278  FLLKGWSEQNPNL---GDACSDLQRILF----SHQILQILQIYCH 165
            F+ KG  E +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 152  EPNYRRICCLLQIWTTVSTAIIPVTGHD*FPDLV 51
            E +Y  +  L+ +W+ VST    +  +D F D V
Sbjct: 1037 ERSYATVAFLIALWSCVSTPFFFLDEYDVFTDQV 1070


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 149 PNYRRICCLLQIWTTVSTAII 87
           P++R + CLL  WT +   +I
Sbjct: 246 PDWRLVLCLLVPWTCICLTLI 266


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 149 PNYRRICCLLQIWTTVSTAII 87
           P++R + CLL  WT +   +I
Sbjct: 246 PDWRLVLCLLVPWTCICLTLI 266


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 156 LATVAVDLEDLEDLVGKKDSLEVRTCVAQIGILFT 260
           L  +A+D+  L+  +GKK +L V   +  +G + +
Sbjct: 176 LMAIAIDMNPLKPRMGKKATLCVAASIWIVGTIIS 210


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 162 TVAVDLEDLEDLVGKKDSLEVRTCVAQIGILFTPT 266
           T A  L  +  L+ K+DSLE+RT    I ++  PT
Sbjct: 225 TAAFMLPMIHHLLDKEDSLELRTRNPYI-VIVAPT 258


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -3

Query: 242 LGDACSDLQRILFSHQILQI---LQIYCHRCQIEPNYRRICCLLQIWTTVSTAI 90
           L +A   +++   S  IL++    +I CHRC+   + +R C +    T  ST +
Sbjct: 177 LDEAQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDCPMESNNTPTSTTM 230


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 143 YRRICCLLQIWTTVSTAI 90
           + +IC  + IW TV+ AI
Sbjct: 137 FAQICHTISIWLTVTLAI 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,855
Number of Sequences: 2352
Number of extensions: 5072
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)