Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021004
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    25   2.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   5.4  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    23   9.5  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    23   9.5  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    23   9.5  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 576 LVMAINDYYESNLIYNVFNWNVT 644
           L +   D ++  L YN+  WNVT
Sbjct: 88  LYLNAGDNFQGTLWYNLLRWNVT 110


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 349 CIFKQKHRDINHFLCFQKVIGLVYYK 426
           CI  QK  DI H     ++  L+Y K
Sbjct: 102 CIHNQKSADIKHRALHNEIKSLLYQK 127


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 633 WNVTFTVEIILQKKAFHRDPN 695
           WN T  V+    +  FH DPN
Sbjct: 97  WNDTHGVQEASMRSFFHPDPN 117


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 633 WNVTFTVEIILQKKAFHRDPN 695
           WN T  V+    +  FH DPN
Sbjct: 81  WNDTHGVQEASMRSFFHPDPN 101


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 633 WNVTFTVEIILQKKAFHRDPN 695
           WN T  V+    +  FH DPN
Sbjct: 97  WNDTHGVQEASMRSFFHPDPN 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,452
Number of Sequences: 2352
Number of extensions: 11046
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)