Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0023
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   4.0  
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    24   4.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   5.3  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   9.2  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 557 HLTCSTLYVMLCIGGL 510
           HL   TL V LC+GGL
Sbjct: 182 HLFALTLSVCLCVGGL 197


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 421 ETLERQGVAVLARSFCGPPRT*SSHGNSRVSPPIQSIT*SVEHVR 555
           E + +  V   A+  C P     S G+  V PP   +T  VE +R
Sbjct: 62  EGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLR 106


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 190  ELLEASRGVDLLREVKDGLHGRAGPEVRQEHRQQRLVKLLLVGA 59
            ++ EA R +   REV++    R+    RQ+ RQQRL    LV A
Sbjct: 1041 DMAEAERRLLRRREVRN----RSAQRRRQQQRQQRLGDFELVPA 1080


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 6/26 (23%), Positives = 14/26 (53%)
 Frame = +2

Query: 608 RALLRIIGLISLFHSCRGHIDTWSNY 685
           R+  + +G +++   C G + +W  Y
Sbjct: 296 RSFGKYVGRLTVNFDCEGEVQSWEGY 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,756
Number of Sequences: 2352
Number of extensions: 16234
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)