Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30036
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 111 1e-24
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 111 1e-24
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 111 1e-24
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 111 1e-24
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 111 1e-24
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 111 1e-24
BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein. 29 8.9
AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 29 8.9
AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 29 8.9
AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+... 29 8.9
AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein. 29 8.9
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 111 bits (268), Expect = 1e-24
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 438
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 439 PAPGAPRSHTKPYVRTKGH--EKAR 507
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 91.1 bits (216), Expect = 3e-18
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = +2
Query: 8 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLASH 187
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 188 MKKPTREGLIAVVVGTVTNDV 250
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 111 bits (268), Expect = 1e-24
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 438
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 71 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 130
Query: 439 PAPGAPRSHTKPYVRTKGH--EKAR 507
APG P SHTKPYVR+KG E+AR
Sbjct: 131 KAPGTPHSHTKPYVRSKGRKFERAR 155
Score = 74.5 bits (175), Expect = 2e-13
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = +2
Query: 95 TNAKFNQIVLRRLFMSRINRPPISVSRLASHMKKPTREGLIAVVVGTVTNDV 250
TN+ FNQ+VL+RLFMSR NRPP+S+SR+ MK P RE AVVVGT+T+DV
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDV 67
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 111 bits (268), Expect = 1e-24
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 438
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 439 PAPGAPRSHTKPYVRTKGH--EKAR 507
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 89.0 bits (211), Expect = 1e-17
Identities = 45/81 (55%), Positives = 53/81 (65%)
Frame = +2
Query: 8 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLASH 187
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+ +SR+
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLCLSRMIRK 69
Query: 188 MKKPTREGLIAVVVGTVTNDV 250
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 111 bits (268), Expect = 1e-24
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 438
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 439 PAPGAPRSHTKPYVRTKGH--EKAR 507
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 91.1 bits (216), Expect = 3e-18
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = +2
Query: 8 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLASH 187
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 188 MKKPTREGLIAVVVGTVTNDV 250
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 111 bits (268), Expect = 1e-24
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 438
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 439 PAPGAPRSHTKPYVRTKGH--EKAR 507
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 91.1 bits (216), Expect = 3e-18
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = +2
Query: 8 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLASH 187
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 188 MKKPTREGLIAVVVGTVTNDV 250
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 111 bits (268), Expect = 1e-24
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 438
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 439 PAPGAPRSHTKPYVRTKGH--EKAR 507
APG P SHTKPYVR+KG E+AR
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR 178
Score = 91.1 bits (216), Expect = 3e-18
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = +2
Query: 8 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLASH 187
DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+SR+
Sbjct: 10 DRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRK 69
Query: 188 MKKPTREGLIAVVVGTVTNDV 250
MK P RE AVVVGT+T+DV
Sbjct: 70 MKLPGRENKTAVVVGTITDDV 90
>BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein.
Length = 1069
Score = 29.5 bits (63), Expect = 8.9
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 441
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 442 AP-GAPRSHTKPYVRTK 489
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger protein.
Length = 1099
Score = 29.5 bits (63), Expect = 8.9
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 441
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 442 AP-GAPRSHTKPYVRTK 489
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger splice variant protein.
Length = 1099
Score = 29.5 bits (63), Expect = 8.9
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 441
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 442 AP-GAPRSHTKPYVRTK 489
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+
exchanger protein.
Length = 1081
Score = 29.5 bits (63), Expect = 8.9
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 441
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 114 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 168
Query: 442 AP-GAPRSHTKPYVRTK 489
P G +S++ VR K
Sbjct: 169 TPRGEMKSYSPTQVREK 185
>AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein.
Length = 988
Score = 29.5 bits (63), Expect = 8.9
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGP 441
+PK T + T K AAG E D PT +T+ ++R+ V+ + P
Sbjct: 117 MPKRTAKMIPTTTKNNYSPTAAGTERRKED-----TPTSSRTLTYYTSTSSRQIVKKYTP 171
Query: 442 AP-GAPRSHTKPYVRTK 489
P G +S++ VR K
Sbjct: 172 TPRGEMKSYSPTQVREK 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,905,170
Number of Sequences: 237096
Number of extensions: 2072189
Number of successful extensions: 4534
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4532
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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