Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30026X
(380 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome, ma... 100 1e-21
BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome, ma... 100 1e-21
BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome, ma... 100 1e-21
AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPa... 100 1e-21
AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit ... 100 1e-21
AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit ... 100 1e-21
AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit ... 100 1e-21
AK131475-1|BAD18620.1| 832|Homo sapiens protein ( Homo sapiens ... 28 8.7
AK057429-1|BAB71482.1| 452|Homo sapiens protein ( Homo sapiens ... 28 8.7
>BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 100 bits (240), Expect = 1e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LTL++ +FV++P +GD LI+LY NF++ FE ++NPLSLVEII H+V Q + A+TF
Sbjct: 37 LTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTF 96
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLN 264
LEK KVK +DEA+ LCK G + LN
Sbjct: 97 LEKTREKVKSSDEAVILCKTAIGALKLN 124
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 267 LNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
+ D ++ IE +E L + GVT VH RFY L+
Sbjct: 125 IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLS 159
>BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 100 bits (240), Expect = 1e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LTL++ +FV++P +GD LI+LY NF++ FE ++NPLSLVEII H+V Q + A+TF
Sbjct: 37 LTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTF 96
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLN 264
LEK KVK +DEA+ LCK G + LN
Sbjct: 97 LEKTREKVKSSDEAVILCKTAIGALKLN 124
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 267 LNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
+ D ++ IE +E L + GVT VH RFY L+
Sbjct: 125 IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLS 159
>BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 100 bits (240), Expect = 1e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LTL++ +FV++P +GD LI+LY NF++ FE ++NPLSLVEII H+V Q + A+TF
Sbjct: 37 LTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTF 96
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLN 264
LEK KVK +DEA+ LCK G + LN
Sbjct: 97 LEKTREKVKSSDEAVILCKTAIGALKLN 124
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 267 LNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
+ D ++ IE +E L + GVT VH RFY L+
Sbjct: 125 IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLS 159
>AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPase
subunit 13 isoform 1 variant protein.
Length = 376
Score = 100 bits (240), Expect = 1e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LTL++ +FV++P +GD LI+LY NF++ FE ++NPLSLVEII H+V Q + A+TF
Sbjct: 37 LTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTF 96
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLN 264
LEK KVK +DEA+ LCK G + LN
Sbjct: 97 LEKTREKVKSSDEAVILCKTAIGALKLN 124
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 267 LNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
+ D ++ IE +E L + GVT VH RFY L+
Sbjct: 125 IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLS 159
>AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 100 bits (240), Expect = 1e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LTL++ +FV++P +GD LI+LY NF++ FE ++NPLSLVEII H+V Q + A+TF
Sbjct: 37 LTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTF 96
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLN 264
LEK KVK +DEA+ LCK G + LN
Sbjct: 97 LEKTREKVKSSDEAVILCKTAIGALKLN 124
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 267 LNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
+ D ++ IE +E L + GVT VH RFY L+
Sbjct: 125 IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLS 159
>AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit 11
protein.
Length = 376
Score = 100 bits (240), Expect = 1e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LTL++ +FV++P +GD LI+LY NF++ FE ++NPLSLVEII H+V Q + A+TF
Sbjct: 37 LTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTF 96
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLN 264
LEK KVK +DEA+ LCK G + LN
Sbjct: 97 LEKTREKVKSSDEAVILCKTAIGALKLN 124
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 267 LNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
+ D ++ IE +E L + GVT VH RFY L+
Sbjct: 125 IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLS 159
>AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 100 bits (240), Expect = 1e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LTL++ +FV++P +GD LI+LY NF++ FE ++NPLSLVEII H+V Q + A+TF
Sbjct: 37 LTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTF 96
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLN 264
LEK KVK +DEA+ LCK G + LN
Sbjct: 97 LEKTREKVKSSDEAVILCKTAIGALKLN 124
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 267 LNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
+ D ++ IE +E L + GVT VH RFY L+
Sbjct: 125 IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLS 159
>AK131475-1|BAD18620.1| 832|Homo sapiens protein ( Homo sapiens
cDNA FLJ16643 fis, clone TESTI4029528. ).
Length = 832
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 13 LQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKV 192
L E V N L G L + L FE I ++ +++HIVE++ N +++ +++
Sbjct: 581 LFEPVVNALLDNGTRYNMLNSAILELFEY-IRVENIKPLVSHIVEKFYNTLESIEYVQTF 639
Query: 193 E-TKVKMNDE 219
+ K+K E
Sbjct: 640 KGLKIKYEKE 649
>AK057429-1|BAB71482.1| 452|Homo sapiens protein ( Homo sapiens
cDNA FLJ32867 fis, clone TESTI2003727. ).
Length = 452
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 13 LQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKV 192
L E V N L G L + L FE I ++ +++HIVE++ N +++ +++
Sbjct: 277 LFEPVVNALLDNGTRYNMLNSAILELFEY-IRVENIKPLVSHIVEKFYNTLESIEYVQTF 335
Query: 193 E-TKVKMNDE 219
+ K+K E
Sbjct: 336 KGLKIKYEKE 345
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,905,671
Number of Sequences: 237096
Number of extensions: 1020038
Number of successful extensions: 2076
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2076
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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