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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00006
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06347-1|CAA29653.1|  282|Homo sapiens protein ( Human mRNA for ...   144   3e-34
M60784-1|AAA61245.1|  282|Homo sapiens U1 snRNP-specific protein...   144   3e-34
BC008290-1|AAH08290.1|  282|Homo sapiens small nuclear ribonucle...   144   3e-34
BC000405-1|AAH00405.1|  282|Homo sapiens small nuclear ribonucle...   144   3e-34
M15841-1|AAA36796.1|  225|Homo sapiens protein ( Human U2 small ...   133   5e-31
BC036737-1|AAH36737.1|  225|Homo sapiens small nuclear ribonucle...   133   5e-31
BC018022-1|AAH18022.1|  225|Homo sapiens small nuclear ribonucle...   133   5e-31
BC008311-1|AAH08311.1|  109|Homo sapiens Similar to small nuclea...   133   5e-31
AL034428-1|CAB38777.2|  225|Homo sapiens small nuclear ribonucle...   133   5e-31
D78134-1|BAA11212.1|  172|Homo sapiens CIRP protein.                   41   0.004
BT007210-1|AAP35874.1|  172|Homo sapiens cold inducible RNA bind...    41   0.004
BC000901-1|AAH00901.1|  172|Homo sapiens cold inducible RNA bind...    41   0.004
BC000403-1|AAH00403.1|  172|Homo sapiens cold inducible RNA bind...    41   0.004
AF021336-1|AAC51787.1|  172|Homo sapiens DNA damage-inducible RN...    41   0.004
AC004258-1|AAC04895.1|  172|Homo sapiens CIRP protein.                 41   0.004
BC024208-1|AAH24208.1|  423|Homo sapiens RNA binding motif prote...    40   0.010
BC002566-1|AAH02566.1|  424|Homo sapiens RNA binding motif prote...    40   0.010
AK001344-1|BAA91638.1|  406|Homo sapiens protein ( Homo sapiens ...    40   0.010
AF275678-1|AAG24388.1|  418|Homo sapiens PP239 protein protein.        40   0.010
BX322653-1|CAH72167.1|  517|Homo sapiens novel protein protein.        39   0.018
BC010697-1|AAH10697.2|  517|Homo sapiens RNA-binding region (RNP...    39   0.018
AY099329-1|AAM45139.1|  517|Homo sapiens RNA recognition protein...    39   0.018
AK057799-1|BAB71580.1|  517|Homo sapiens protein ( Homo sapiens ...    39   0.018
AB058742-1|BAB47468.1|  541|Homo sapiens KIAA1839 protein protein.     39   0.018
AK128423-1|BAC87434.1|  135|Homo sapiens protein ( Homo sapiens ...    38   0.024
CR457257-1|CAG33538.1|  423|Homo sapiens RNPC4 protein.                37   0.055
L10911-1|AAA16347.1|  530|Homo sapiens splicing factor protein.        35   0.29 
L10910-1|AAA16346.1|  524|Homo sapiens splicing factor protein.        35   0.29 
BX537770-1|CAD97833.1|  373|Homo sapiens hypothetical protein pr...    35   0.29 
BC141835-1|AAI41836.1|  530|Homo sapiens RNA binding motif prote...    35   0.29 
BC131543-1|AAI31544.1|  508|Homo sapiens RBM39 protein protein.        35   0.29 
AL357374-9|CAC11119.1|  524|Homo sapiens RNA binding motif prote...    35   0.29 
AL357374-8|CAC11118.1|  530|Homo sapiens RNA binding motif prote...    35   0.29 
BC006986-1|AAH06986.1|  413|Homo sapiens RNA binding motif prote...    34   0.39 
AL109839-2|CAI95632.1|  330|Homo sapiens chromosome 20 open read...    33   0.67 
AL109839-1|CAI95631.1|  614|Homo sapiens chromosome 20 open read...    33   0.67 
AL008725-5|CAI95663.1|  330|Homo sapiens chromosome 20 open read...    33   0.67 
AL008725-4|CAI95662.1|  614|Homo sapiens chromosome 20 open read...    33   0.67 
X66975-1|CAA47386.1|  557|Homo sapiens nuclear ribonucleoprotein...    33   1.2  
X65372-1|CAA46444.1|  557|Homo sapiens polypirimidine tract  bin...    33   1.2  
X65371-1|CAA46443.1|  550|Homo sapiens polypirimidine tract  bin...    33   1.2  
X62006-1|CAA43973.1|  531|Homo sapiens polypirimidine tract  bin...    33   1.2  
X60648-1|CAA43056.1|  531|Homo sapiens polypyrimidine tract-bind...    33   1.2  
BT006819-1|AAP35465.1|  557|Homo sapiens polypyrimidine tract bi...    33   1.2  
BC041956-1|AAH41956.1|  243|Homo sapiens LOC645974 protein protein.    33   1.2  
BC013694-1|AAH13694.1|  557|Homo sapiens polypyrimidine tract bi...    33   1.2  
BC004383-1|AAH04383.1|  531|Homo sapiens polypyrimidine tract bi...    33   1.2  
BC002397-1|AAH02397.1|  557|Homo sapiens polypyrimidine tract bi...    33   1.2  
AL662864-2|CAI40931.1|  200|Homo sapiens novel protein similar t...    33   1.2  
AL662864-1|CAI40930.1|  200|Homo sapiens novel protein similar t...    33   1.2  
AC006273-1|AAC99798.1|  531|Homo sapiens PTB_HUMAN protein.            33   1.2  
AB208910-1|BAD92147.1|  329|Homo sapiens polypyrimidine tract-bi...    33   1.2  
AL390039-3|CAI41564.1|  413|Homo sapiens novel protein protein.        32   1.6  
AL390039-2|CAC19636.1|  405|Homo sapiens novel protein protein.        32   1.6  
AK001878-1|BAA91957.1|  405|Homo sapiens protein ( Homo sapiens ...    32   1.6  
BC034381-1|AAH34381.1|  266|Homo sapiens RNA binding motif prote...    32   2.1  
AK002015-1|BAA92036.1|  267|Homo sapiens protein ( Homo sapiens ...    32   2.1  
AF156098-1|AAD39257.1|  266|Homo sapiens RNA binding motif prote...    32   2.1  
AB209753-1|BAD92990.1|  155|Homo sapiens Hypothetical protein FL...    32   2.1  
U75686-1|AAB97309.1|  644|Homo sapiens polyadenylate binding pro...    31   2.7  
U33818-1|AAC50350.1|  644|Homo sapiens inducible poly(A)-binding...    31   2.7  
BC094755-1|AAH94755.1|  660|Homo sapiens PABPC4 protein protein.       31   2.7  
BC071591-1|AAH71591.1|  660|Homo sapiens PABPC4 protein protein.       31   2.7  
BC070262-1|AAH70262.1|  266|Homo sapiens RNA binding motif prote...    31   2.7  
BC033674-1|AAH33674.1|  283|Homo sapiens bol, boule-like (Drosop...    31   2.7  
AM295005-1|CAL25726.1|  289|Homo sapiens boll protein protein.         31   2.7  
AL845289-3|CAI12300.1|  644|Homo sapiens poly(A) binding protein...    31   2.7  
AL845289-2|CAI12298.1|  660|Homo sapiens poly(A) binding protein...    31   2.7  
AL845289-1|CAI12299.1|  615|Homo sapiens poly(A) binding protein...    31   2.7  
AL365277-4|CAI16414.1|  644|Homo sapiens poly(A) binding protein...    31   2.7  
AL365277-3|CAI16412.1|  660|Homo sapiens poly(A) binding protein...    31   2.7  
AL365277-2|CAI16413.1|  615|Homo sapiens poly(A) binding protein...    31   2.7  
AK093453-1|BAC04171.1|  339|Homo sapiens protein ( Homo sapiens ...    31   2.7  
AK058099-1|BAB71664.1|  283|Homo sapiens protein ( Homo sapiens ...    31   2.7  
AF272858-1|AAK58689.1|  283|Homo sapiens BOULE protein.                31   2.7  
AC011997-1|AAX93045.1|  283|Homo sapiens unknown protein.              31   2.7  
D12799-1|BAA02244.1|  193|Homo sapiens polyadenylate binding pro...    31   4.7  
BC139836-1|AAI39837.1|  563|Homo sapiens RBM15B protein protein.       31   4.7  
BC105582-1|AAI05583.1|  173|Homo sapiens RBMX2 protein protein.        31   4.7  
BC065540-1|AAH65540.1|  631|Homo sapiens PABPC4 protein protein.       31   4.7  
BC044585-1|AAH44585.1|  558|Homo sapiens ROD1 protein protein.         31   4.7  
BC039896-1|AAH39896.1|  618|Homo sapiens Similar to ROD1 regulat...    31   4.7  
BC033750-1|AAH33750.1|  322|Homo sapiens RNA binding motif prote...    31   4.7  
BC003676-1|AAH03676.1|  163|Homo sapiens Unknown (protein for IM...    31   4.7  
AL359073-2|CAI14113.1|  552|Homo sapiens ROD1 regulator of diffe...    31   4.7  
AL158824-9|CAI12354.1|  457|Homo sapiens ROD1 regulator of diffe...    31   4.7  
AL158824-8|CAI12353.1|  524|Homo sapiens ROD1 regulator of diffe...    31   4.7  
AL158824-5|CAI12350.1|  552|Homo sapiens ROD1 regulator of diffe...    31   4.7  
AL050405-1|CAB43745.1|  322|Homo sapiens hypothetical protein pr...    31   4.7  
AL035423-8|CAI42444.1|  322|Homo sapiens RNA binding motif prote...    31   4.7  
AF151837-1|AAD34074.1|  351|Homo sapiens CGI-79 protein protein.       31   4.7  
AB208812-1|BAD92049.1|  338|Homo sapiens H2.0-like homeo box 1 v...    31   4.7  
AB023967-1|BAA75466.1|  521|Homo sapiens Rod1 protein.                 31   4.7  
X75755-1|CAA53383.1|  221|Homo sapiens PR264/SC35 protein.             30   6.3  
X62447-1|CAA44307.1|  221|Homo sapiens PR 264 protein.                 30   6.3  
BT007250-1|AAP35914.1|  221|Homo sapiens splicing factor, argini...    30   6.3  
BC070086-1|AAH70086.1|  221|Homo sapiens splicing factor, argini...    30   6.3  
BC001303-1|AAH01303.1|  221|Homo sapiens SFRS2 protein protein.        30   6.3  
BC000339-1|AAH00339.1|  221|Homo sapiens SFRS2 protein protein.        30   6.3  
AK223252-1|BAD96972.1|  221|Homo sapiens splicing factor, argini...    30   6.3  
AK092489-1|BAC03903.1|  201|Homo sapiens protein ( Homo sapiens ...    30   6.3  
U78525-1|AAC99479.1|  814|Homo sapiens eukaryotic translation in...    30   8.3  
U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.           30   8.3  
BC110865-1|AAI10866.1|  814|Homo sapiens eukaryotic translation ...    30   8.3  
BC009986-1|AAH09986.1|  622|Homo sapiens Unknown (protein for IM...    30   8.3  
BC001173-1|AAH01173.1|  814|Homo sapiens EIF3S9 protein protein.       30   8.3  
AL365412-1|CAB96956.1|  144|Homo sapiens hypothetical protein, s...    30   8.3  
AC004971-1|AAP21880.1|  385|Homo sapiens unknown protein.              30   8.3  

>X06347-1|CAA29653.1|  282|Homo sapiens protein ( Human mRNA for U1
           small nuclear RNP-specific A protein. ).
          Length = 282

 Score =  144 bits (348), Expect = 3e-34
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           +ELKKSLYAIFSQFGQILDI+  ++LKMRGQAFVIF+E+SSAT ALRSMQGFPFYDKPMR
Sbjct: 24  DELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMR 83

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDIIAK KGTF ER ++
Sbjct: 84  IQYAKTDSDIIAKMKGTFVERDRK 107



 Score = 95.9 bits (228), Expect = 1e-19
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = +3

Query: 360 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           +E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVE +
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFD 252



 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           NE+Q+ AA++ALQGFKIT  +AMKI+FAKK
Sbjct: 253 NEVQAGAARDALQGFKITQNNAMKISFAKK 282


>M60784-1|AAA61245.1|  282|Homo sapiens U1 snRNP-specific protein A
           protein.
          Length = 282

 Score =  144 bits (348), Expect = 3e-34
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           +ELKKSLYAIFSQFGQILDI+  ++LKMRGQAFVIF+E+SSAT ALRSMQGFPFYDKPMR
Sbjct: 24  DELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMR 83

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDIIAK KGTF ER ++
Sbjct: 84  IQYAKTDSDIIAKMKGTFVERDRK 107



 Score = 95.9 bits (228), Expect = 1e-19
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = +3

Query: 360 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           +E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVE +
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFD 252



 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           NE+Q+ AA++ALQGFKIT  +AMKI+FAKK
Sbjct: 253 NEVQAGAARDALQGFKITQNNAMKISFAKK 282


>BC008290-1|AAH08290.1|  282|Homo sapiens small nuclear
           ribonucleoprotein polypeptide A protein.
          Length = 282

 Score =  144 bits (348), Expect = 3e-34
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           +ELKKSLYAIFSQFGQILDI+  ++LKMRGQAFVIF+E+SSAT ALRSMQGFPFYDKPMR
Sbjct: 24  DELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMR 83

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDIIAK KGTF ER ++
Sbjct: 84  IQYAKTDSDIIAKMKGTFVERDRK 107



 Score = 95.9 bits (228), Expect = 1e-19
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = +3

Query: 360 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           +E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVE +
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFD 252



 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           NE+Q+ AA++ALQGFKIT  +AMKI+FAKK
Sbjct: 253 NEVQAGAARDALQGFKITQNNAMKISFAKK 282


>BC000405-1|AAH00405.1|  282|Homo sapiens small nuclear
           ribonucleoprotein polypeptide A protein.
          Length = 282

 Score =  144 bits (348), Expect = 3e-34
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           +ELKKSLYAIFSQFGQILDI+  ++LKMRGQAFVIF+E+SSAT ALRSMQGFPFYDKPMR
Sbjct: 24  DELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMR 83

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDIIAK KGTF ER ++
Sbjct: 84  IQYAKTDSDIIAKMKGTFVERDRK 107



 Score = 95.9 bits (228), Expect = 1e-19
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = +3

Query: 360 AEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           +E PPN ILFLTNLP+ET+E+MLSMLFNQFPGFKEVRLVP RHDIAFVE +
Sbjct: 202 SENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFD 252



 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           NE+Q+ AA++ALQGFKIT  +AMKI+FAKK
Sbjct: 253 NEVQAGAARDALQGFKITQNNAMKISFAKK 282


>M15841-1|AAA36796.1|  225|Homo sapiens protein ( Human U2 small
           nuclear RNA-associated B'' antigen mRNA, complete cds.
           ).
          Length = 225

 Score =  133 bits (322), Expect = 5e-31
 Identities = 59/84 (70%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           EELK+SLYA+FSQFG ++DIVA+KT+KMRGQAFVIF+E+ S+T ALR +QGFPFY KPMR
Sbjct: 21  EELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMR 80

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDII+K +GTF ++ K+
Sbjct: 81  IQYAKTDSDIISKMRGTFADKEKK 104



 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = +3

Query: 363 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRLVP RHDIAFVE E
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFE 195



 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           N+ Q+ AA++ALQGFKITP+HAMKIT+AKK
Sbjct: 196 NDGQAGAARDALQGFKITPSHAMKITYAKK 225


>BC036737-1|AAH36737.1|  225|Homo sapiens small nuclear
           ribonucleoprotein polypeptide B'' protein.
          Length = 225

 Score =  133 bits (322), Expect = 5e-31
 Identities = 59/84 (70%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           EELK+SLYA+FSQFG ++DIVA+KT+KMRGQAFVIF+E+ S+T ALR +QGFPFY KPMR
Sbjct: 21  EELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMR 80

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDII+K +GTF ++ K+
Sbjct: 81  IQYAKTDSDIISKMRGTFADKEKK 104



 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = +3

Query: 363 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRLVP RHDIAFVE E
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFE 195



 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           N+ Q+ AA++ALQGFKITP+HAMKIT+AKK
Sbjct: 196 NDGQAGAARDALQGFKITPSHAMKITYAKK 225


>BC018022-1|AAH18022.1|  225|Homo sapiens small nuclear
           ribonucleoprotein polypeptide B'' protein.
          Length = 225

 Score =  133 bits (322), Expect = 5e-31
 Identities = 59/84 (70%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           EELK+SLYA+FSQFG ++DIVA+KT+KMRGQAFVIF+E+ S+T ALR +QGFPFY KPMR
Sbjct: 21  EELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMR 80

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDII+K +GTF ++ K+
Sbjct: 81  IQYAKTDSDIISKMRGTFADKEKK 104



 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = +3

Query: 363 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRLVP RHDIAFVE E
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFE 195



 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           N+ Q+ AA++ALQGFKITP+HAMKIT+AKK
Sbjct: 196 NDGQAGAARDALQGFKITPSHAMKITYAKK 225


>BC008311-1|AAH08311.1|  109|Homo sapiens Similar to small nuclear
           ribonucleoprotein polypeptide B'' protein.
          Length = 109

 Score =  133 bits (322), Expect = 5e-31
 Identities = 59/84 (70%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           EELK+SLYA+FSQFG ++DIVA+KT+KMRGQAFVIF+E+ S+T ALR +QGFPFY KPMR
Sbjct: 21  EELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMR 80

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDII+K +GTF ++ K+
Sbjct: 81  IQYAKTDSDIISKMRGTFADKEKK 104


>AL034428-1|CAB38777.2|  225|Homo sapiens small nuclear
           ribonucleoprotein polypeptide B'' protein.
          Length = 225

 Score =  133 bits (322), Expect = 5e-31
 Identities = 59/84 (70%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           EELK+SLYA+FSQFG ++DIVA+KT+KMRGQAFVIF+E+ S+T ALR +QGFPFY KPMR
Sbjct: 21  EELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMR 80

Query: 181 IQYSKIDSDIIAKSKGTFQERPKR 252
           IQY+K DSDII+K +GTF ++ K+
Sbjct: 81  IQYAKTDSDIISKMRGTFADKEKK 104



 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = +3

Query: 363 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIAFVELE 512
           + PPN ILFL NLP+ET+EMMLSMLFNQFPGFKEVRLVP RHDIAFVE E
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFE 195



 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = +2

Query: 512 NEMQSAAAKEALQGFKITPTHAMKITFAKK 601
           N+ Q+ AA++ALQGFKITP+HAMKIT+AKK
Sbjct: 196 NDGQAGAARDALQGFKITPSHAMKITYAKK 225


>D78134-1|BAA11212.1|  172|Homo sapiens CIRP protein.
          Length = 172

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +1

Query: 10  KKSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           ++SL  +FS++GQI ++V +K   T + RG  FV F  I  A  A+ +M G     + +R
Sbjct: 19  EQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIR 78

Query: 181 IQYSKIDSD 207
           +  +   SD
Sbjct: 79  VDQAGKSSD 87


>BT007210-1|AAP35874.1|  172|Homo sapiens cold inducible RNA binding
           protein protein.
          Length = 172

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +1

Query: 10  KKSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           ++SL  +FS++GQI ++V +K   T + RG  FV F  I  A  A+ +M G     + +R
Sbjct: 19  EQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIR 78

Query: 181 IQYSKIDSD 207
           +  +   SD
Sbjct: 79  VDQAGKSSD 87


>BC000901-1|AAH00901.1|  172|Homo sapiens cold inducible RNA binding
           protein protein.
          Length = 172

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +1

Query: 10  KKSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           ++SL  +FS++GQI ++V +K   T + RG  FV F  I  A  A+ +M G     + +R
Sbjct: 19  EQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIR 78

Query: 181 IQYSKIDSD 207
           +  +   SD
Sbjct: 79  VDQAGKSSD 87


>BC000403-1|AAH00403.1|  172|Homo sapiens cold inducible RNA binding
           protein protein.
          Length = 172

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +1

Query: 10  KKSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           ++SL  +FS++GQI ++V +K   T + RG  FV F  I  A  A+ +M G     + +R
Sbjct: 19  EQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIR 78

Query: 181 IQYSKIDSD 207
           +  +   SD
Sbjct: 79  VDQAGKSSD 87


>AF021336-1|AAC51787.1|  172|Homo sapiens DNA damage-inducible RNA
           binding protein protein.
          Length = 172

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +1

Query: 10  KKSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           ++SL  +FS++GQI ++V +K   T + RG  FV F  I  A  A+ +M G     + +R
Sbjct: 19  EQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIR 78

Query: 181 IQYSKIDSD 207
           +  +   SD
Sbjct: 79  VDQAGKSSD 87


>AC004258-1|AAC04895.1|  172|Homo sapiens CIRP protein.
          Length = 172

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +1

Query: 10  KKSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMR 180
           ++SL  +FS++GQI ++V +K   T + RG  FV F  I  A  A+ +M G     + +R
Sbjct: 19  EQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIR 78

Query: 181 IQYSKIDSD 207
           +  +   SD
Sbjct: 79  VDQAGKSSD 87


>BC024208-1|AAH24208.1|  423|Homo sapiens RNA binding motif protein
           23 protein.
          Length = 423

 Score = 39.5 bits (88), Expect = 0.010
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I +IV MK   T + +G  F+ F +   A  AL  + GF    +PMR+
Sbjct: 263 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320


>BC002566-1|AAH02566.1|  424|Homo sapiens RNA binding motif protein
           23 protein.
          Length = 424

 Score = 39.5 bits (88), Expect = 0.010
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I +IV MK   T + +G  F+ F +   A  AL  + GF    +PMR+
Sbjct: 263 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320


>AK001344-1|BAA91638.1|  406|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
           GAR2 PROTEIN. ).
          Length = 406

 Score = 39.5 bits (88), Expect = 0.010
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I +IV MK   T + +G  F+ F +   A  AL  + GF    +PMR+
Sbjct: 245 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302


>AF275678-1|AAG24388.1|  418|Homo sapiens PP239 protein protein.
          Length = 418

 Score = 39.5 bits (88), Expect = 0.010
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I +IV MK   T + +G  F+ F +   A  AL  + GF    +PMR+
Sbjct: 257 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 314


>BX322653-1|CAH72167.1|  517|Homo sapiens novel protein protein.
          Length = 517

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 22  YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           Y  FS   Q  + DI  MK  +M+GQAF+      +A  AL+   G+  + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502


>BC010697-1|AAH10697.2|  517|Homo sapiens RNA-binding region (RNP1,
           RRM) containing 3 protein.
          Length = 517

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 22  YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           Y  FS   Q  + DI  MK  +M+GQAF+      +A  AL+   G+  + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502


>AY099329-1|AAM45139.1|  517|Homo sapiens RNA recognition protein
           protein.
          Length = 517

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 22  YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           Y  FS   Q  + DI  MK  +M+GQAF+      +A  AL+   G+  + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502


>AK057799-1|BAB71580.1|  517|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25070 fis, clone CBL05164. ).
          Length = 517

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 22  YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           Y  FS   Q  + DI  MK  +M+GQAF+      +A  AL+   G+  + KPM +Q+++
Sbjct: 443 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 502


>AB058742-1|BAB47468.1|  541|Homo sapiens KIAA1839 protein protein.
          Length = 541

 Score = 38.7 bits (86), Expect = 0.018
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +1

Query: 22  YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           Y  FS   Q  + DI  MK  +M+GQAF+      +A  AL+   G+  + KPM +Q+++
Sbjct: 467 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 526


>AK128423-1|BAC87434.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46566 fis, clone THYMU3040829, moderately
           similar to Cold-inducible RNA-binding protein. ).
          Length = 135

 Score = 38.3 bits (85), Expect = 0.024
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +1

Query: 10  KKSLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQG 153
           ++SL  +FS++GQI ++V +K   T + RG  FV F  I  A  A+ +M G
Sbjct: 19  EQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69


>CR457257-1|CAG33538.1|  423|Homo sapiens RNPC4 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I +IV MK   T + +G   + F +   A  AL  + GF    +PMR+
Sbjct: 263 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGLITFSDSECARRALEQLNGFELAGRPMRV 320


>L10911-1|AAA16347.1|  530|Homo sapiens splicing factor protein.
          Length = 530

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I  I  M   +T + +G  F+ F +   A  AL  + GF    +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323


>L10910-1|AAA16346.1|  524|Homo sapiens splicing factor protein.
          Length = 524

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I  I  M   +T + +G  F+ F +   A  AL  + GF    +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323


>BX537770-1|CAD97833.1|  373|Homo sapiens hypothetical protein
           protein.
          Length = 373

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I  I  M   +T + +G  F+ F +   A  AL  + GF    +PM++
Sbjct: 109 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166


>BC141835-1|AAI41836.1|  530|Homo sapiens RNA binding motif protein
           39 protein.
          Length = 530

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I  I  M   +T + +G  F+ F +   A  AL  + GF    +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323


>BC131543-1|AAI31544.1|  508|Homo sapiens RBM39 protein protein.
          Length = 508

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I  I  M   +T + +G  F+ F +   A  AL  + GF    +PM++
Sbjct: 244 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301


>AL357374-9|CAC11119.1|  524|Homo sapiens RNA binding motif protein
           39 protein.
          Length = 524

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I  I  M   +T + +G  F+ F +   A  AL  + GF    +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323


>AL357374-8|CAC11118.1|  530|Homo sapiens RNA binding motif protein
           39 protein.
          Length = 530

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRI 183
           L  IF  FG+I  I  M   +T + +G  F+ F +   A  AL  + GF    +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323


>BC006986-1|AAH06986.1|  413|Homo sapiens RNA binding motif protein
           41 protein.
          Length = 413

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 67  MKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           M T +MRGQAF+ F     A  AL  + G+  Y K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 386


>AL109839-2|CAI95632.1|  330|Homo sapiens chromosome 20 open reading
           frame 119 protein.
          Length = 330

 Score = 33.5 bits (73), Expect = 0.67
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           K+LY  FS FG IL   VA      RG  FV F    +A  A+ +M G    D+ + + +
Sbjct: 113 KALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 172

Query: 190 SK 195
            K
Sbjct: 173 FK 174


>AL109839-1|CAI95631.1|  614|Homo sapiens chromosome 20 open reading
           frame 119 protein.
          Length = 614

 Score = 33.5 bits (73), Expect = 0.67
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           K+LY  FS FG IL   VA      RG  FV F    +A  A+ +M G    D+ + + +
Sbjct: 113 KALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 172

Query: 190 SK 195
            K
Sbjct: 173 FK 174


>AL008725-5|CAI95663.1|  330|Homo sapiens chromosome 20 open reading
           frame 119 protein.
          Length = 330

 Score = 33.5 bits (73), Expect = 0.67
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           K+LY  FS FG IL   VA      RG  FV F    +A  A+ +M G    D+ + + +
Sbjct: 113 KALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 172

Query: 190 SK 195
            K
Sbjct: 173 FK 174


>AL008725-4|CAI95662.1|  614|Homo sapiens chromosome 20 open reading
           frame 119 protein.
          Length = 614

 Score = 33.5 bits (73), Expect = 0.67
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           K+LY  FS FG IL   VA      RG  FV F    +A  A+ +M G    D+ + + +
Sbjct: 113 KALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 172

Query: 190 SK 195
            K
Sbjct: 173 FK 174


>X66975-1|CAA47386.1|  557|Homo sapiens nuclear ribonucleoprotein
           protein.
          Length = 557

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>X65372-1|CAA46444.1|  557|Homo sapiens polypirimidine tract
           binding protein protein.
          Length = 557

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>X65371-1|CAA46443.1|  550|Homo sapiens polypirimidine tract
           binding protein protein.
          Length = 550

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>X62006-1|CAA43973.1|  531|Homo sapiens polypirimidine tract
           binding protein protein.
          Length = 531

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>X60648-1|CAA43056.1|  531|Homo sapiens polypyrimidine tract-binding
            protein (pPTB) protein.
          Length = 531

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>BT006819-1|AAP35465.1|  557|Homo sapiens polypyrimidine tract
           binding protein 1 protein.
          Length = 557

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>BC041956-1|AAH41956.1|  243|Homo sapiens LOC645974 protein protein.
          Length = 243

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQG 153
           K+LY IFS FG IL   VA      +G  FV F++  SA  A+  M G
Sbjct: 147 KALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNG 194


>BC013694-1|AAH13694.1|  557|Homo sapiens polypyrimidine tract
           binding protein 1 protein.
          Length = 557

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>BC004383-1|AAH04383.1|  531|Homo sapiens polypyrimidine tract
           binding protein 1 protein.
          Length = 531

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>BC002397-1|AAH02397.1|  557|Homo sapiens polypyrimidine tract
           binding protein 1 protein.
          Length = 557

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>AL662864-2|CAI40931.1|  200|Homo sapiens novel protein similar to
           poly(A)binding protein, cytoplasmic 1 (LOC340530)
           protein.
          Length = 200

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQG 153
           K+LY IFS FG IL   VA      +G  FV F++  SA  A+  M G
Sbjct: 104 KALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNG 151


>AL662864-1|CAI40930.1|  200|Homo sapiens novel protein similar to
           poly(A)binding protein, cytoplasmic 1 (LOC340529)
           protein.
          Length = 200

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQG 153
           K+LY IFS FG IL   VA      +G  FV F++  SA  A+  M G
Sbjct: 104 KALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNG 151


>AC006273-1|AAC99798.1|  531|Homo sapiens PTB_HUMAN protein.
          Length = 531

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 200 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 258

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 259 KLTSLNVKYNNDKSRDYTRPDLPS 282


>AB208910-1|BAD92147.1|  329|Homo sapiens polypyrimidine
           tract-binding protein 1 isoform c variant protein.
          Length = 329

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  SA  A  S+ G   Y+    +RI +S
Sbjct: 217 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFS 275

Query: 193 KIDSDIIA--KSKGTFQERPKRPS 258
           K+ S  +     K     RP  PS
Sbjct: 276 KLTSLNVKYNNDKSRDYTRPDLPS 299


>AL390039-3|CAI41564.1|  413|Homo sapiens novel protein protein.
          Length = 413

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 67  MKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           M T +MRGQAF+ F     A  AL  + G+  + K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGK 386


>AL390039-2|CAC19636.1|  405|Homo sapiens novel protein protein.
          Length = 405

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 67  MKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           M T +MRGQAF+ F     A  AL  + G+  + K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGK 386


>AK001878-1|BAA91957.1|  405|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11016 fis, clone PLACE1003334. ).
          Length = 405

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 67  MKTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQYSK 195
           M T +MRGQAF+ F     A  AL  + G+  + K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGK 386


>BC034381-1|AAH34381.1|  266|Homo sapiens RNA binding motif protein
           7 protein.
          Length = 266

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           L+ +F Q G ++ +   K    K +  AFV F+   S   A+  + G   Y +P++IQ+
Sbjct: 26  LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 84


>AK002015-1|BAA92036.1|  267|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
           HSH49 PROTEIN. ).
          Length = 267

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           L+ +F Q G ++ +   K    K +  AFV F+   S   A+  + G   Y +P++IQ+
Sbjct: 26  LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 84


>AF156098-1|AAD39257.1|  266|Homo sapiens RNA binding motif protein
           7 protein.
          Length = 266

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           L+ +F Q G ++ +   K    K +  AFV F+   S   A+  + G   Y +P++IQ+
Sbjct: 26  LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 84


>AB209753-1|BAD92990.1|  155|Homo sapiens Hypothetical protein
           FLJ11153 variant protein.
          Length = 155

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           L+ +F Q G ++ +   K    K +  AFV F+   S   A+  + G   Y +P++IQ+
Sbjct: 32  LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 90


>U75686-1|AAB97309.1|  644|Homo sapiens polyadenylate binding
           protein protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>U33818-1|AAC50350.1|  644|Homo sapiens inducible poly(A)-binding
           protein protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>BC094755-1|AAH94755.1|  660|Homo sapiens PABPC4 protein protein.
          Length = 660

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>BC071591-1|AAH71591.1|  660|Homo sapiens PABPC4 protein protein.
          Length = 660

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>BC070262-1|AAH70262.1|  266|Homo sapiens RNA binding motif protein
           7 protein.
          Length = 266

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           L+ +F Q G ++ +   K    K +  AFV F+   S   A+  + G   Y +P++IQ+
Sbjct: 26  LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIRLYGRPIKIQF 84


>BC033674-1|AAH33674.1|  283|Homo sapiens bol, boule-like
           (Drosophila) protein.
          Length = 283

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
 Frame = +3

Query: 372 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIA----FVELEMKCNLQQL- 536
           PN+I F+  +  +T+E  L   F+Q+   KEV++V +R  ++    FV  E + + Q++ 
Sbjct: 32  PNRI-FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKIL 90

Query: 537 ----KKHYKDSK 560
               K +YKD K
Sbjct: 91  QEAEKLNYKDKK 102


>AM295005-1|CAL25726.1|  289|Homo sapiens boll protein protein.
          Length = 289

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
 Frame = +3

Query: 372 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIA----FVELEMKCNLQQL- 536
           PN+I F+  +  +T+E  L   F+Q+   KEV++V +R  ++    FV  E + + Q++ 
Sbjct: 38  PNRI-FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKIL 96

Query: 537 ----KKHYKDSK 560
               K +YKD K
Sbjct: 97  QEAEKLNYKDKK 108


>AL845289-3|CAI12300.1|  644|Homo sapiens poly(A) binding protein,
           cytoplasmic 4 (inducibletaining 6 protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>AL845289-2|CAI12298.1|  660|Homo sapiens poly(A) binding protein,
           cytoplasmic 4 (inducibleseudogene protein.
          Length = 660

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>AL845289-1|CAI12299.1|  615|Homo sapiens poly(A) binding protein,
           cytoplasmic 4 (inducibleeudogene protein.
          Length = 615

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>AL365277-4|CAI16414.1|  644|Homo sapiens poly(A) binding protein,
           cytoplasmic 4 (induciblepeptide, antigen CD29 includes
           protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>AL365277-3|CAI16412.1|  660|Homo sapiens poly(A) binding protein,
           cytoplasmic 4 (inducible) pseudogene protein.
          Length = 660

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>AL365277-2|CAI16413.1|  615|Homo sapiens poly(A) binding protein,
           cytoplasmic 4 (induciblely, member 5 protein.
          Length = 615

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDI-VAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK 171
           K+LY  FS FG IL   V       +G AFV F    +A  A+  M G    D+
Sbjct: 113 KALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166



 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>AK093453-1|BAC04171.1|  339|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
           Homo sapiens germline specific RNA binding protein
           (DAZL1) mRNA. ).
          Length = 339

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
 Frame = +3

Query: 372 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIA----FVELEMKCNLQQL- 536
           PN+I F+  +  +T+E  L   F+Q+   KEV++V +R  ++    FV  E + + Q++ 
Sbjct: 38  PNRI-FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKIL 96

Query: 537 ----KKHYKDSK 560
               K +YKD K
Sbjct: 97  QEAEKLNYKDKK 108


>AK058099-1|BAB71664.1|  283|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25370 fis, clone TST01870. ).
          Length = 283

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
 Frame = +3

Query: 372 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIA----FVELEMKCNLQQL- 536
           PN+I F+  +  +T+E  L   F+Q+   KEV++V +R  ++    FV  E + + Q++ 
Sbjct: 32  PNRI-FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKIL 90

Query: 537 ----KKHYKDSK 560
               K +YKD K
Sbjct: 91  QEAEKLNYKDKK 102


>AF272858-1|AAK58689.1|  283|Homo sapiens BOULE protein.
          Length = 283

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
 Frame = +3

Query: 372 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIA----FVELEMKCNLQQL- 536
           PN+I F+  +  +T+E  L   F+Q+   KEV++V +R  ++    FV  E + + Q++ 
Sbjct: 32  PNRI-FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKIL 90

Query: 537 ----KKHYKDSK 560
               K +YKD K
Sbjct: 91  QEAEKLNYKDKK 102


>AC011997-1|AAX93045.1|  283|Homo sapiens unknown protein.
          Length = 283

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
 Frame = +3

Query: 372 PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPNRHDIA----FVELEMKCNLQQL- 536
           PN+I F+  +  +T+E  L   F+Q+   KEV++V +R  ++    FV  E + + Q++ 
Sbjct: 32  PNRI-FVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKIL 90

Query: 537 ----KKHYKDSK 560
               K +YKD K
Sbjct: 91  QEAEKLNYKDKK 102


>D12799-1|BAA02244.1|  193|Homo sapiens polyadenylate binding
           protein II protein.
          Length = 193

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 16  ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 64


>BC139836-1|AAI39837.1|  563|Homo sapiens RBM15B protein protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPF--YDKPMRIQY 189
           SL A+  +F +   I  +  +K    A++ +  + +A  A   M+GFP    D+ +R+ +
Sbjct: 103 SLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDF 162

Query: 190 SKIDSDIIAKSKGTFQERPKRPSYLKVLMMGRKRKTKILAD 312
           +K +     +    +Q  P  P + ++L  G  R   + AD
Sbjct: 163 AKAEE---TRYPQQYQPSP-LPVHYELLTDGYTRHRNLDAD 199


>BC105582-1|AAI05583.1|  173|Homo sapiens RBMX2 protein protein.
          Length = 173

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           +  +FSQ+G+I++I  +   KT K +G  F+ + +  S  +A+ +  G     + +R+ +
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111


>BC065540-1|AAH65540.1|  631|Homo sapiens PABPC4 protein protein.
          Length = 631

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 13  KSLYAIFSQFGQILDIVAMK--TLKMRGQAFVIFREISSATVALRSMQG 153
           +SL  +FSQFG+ L +  M+    K +G  FV + +   A  A+  M G
Sbjct: 205 ESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNG 253


>BC044585-1|AAH44585.1|  558|Homo sapiens ROD1 protein protein.
          Length = 558

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  +A  A  ++ G   Y+    +RI +S
Sbjct: 204 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 262

Query: 193 KIDS 204
           K+ S
Sbjct: 263 KLTS 266


>BC039896-1|AAH39896.1|  618|Homo sapiens Similar to ROD1 regulator
           of differentiation 1 (S. pombe) protein.
          Length = 618

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  +A  A  ++ G   Y+    +RI +S
Sbjct: 241 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 299

Query: 193 KIDS 204
           K+ S
Sbjct: 300 KLTS 303


>BC033750-1|AAH33750.1|  322|Homo sapiens RNA binding motif protein,
           X-linked 2 protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           +  +FSQ+G+I++I  +   KT K +G  F+ + +  S  +A+ +  G     + +R+ +
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111


>BC003676-1|AAH03676.1|  163|Homo sapiens Unknown (protein for
           IMAGE:3686686) protein.
          Length = 163

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           +  +FSQ+G+I++I  +   KT K +G  F+ + +  S  +A+ +  G     + +R+ +
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111


>AL359073-2|CAI14113.1|  552|Homo sapiens ROD1 regulator of
           differentiation 1 (S. pombe) protein.
          Length = 552

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  +A  A  ++ G   Y+    +RI +S
Sbjct: 198 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 256

Query: 193 KIDS 204
           K+ S
Sbjct: 257 KLTS 260


>AL158824-9|CAI12354.1|  457|Homo sapiens ROD1 regulator of
           differentiation 1 (S. pombe) protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  +A  A  ++ G   Y+    +RI +S
Sbjct: 103 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 161

Query: 193 KIDS 204
           K+ S
Sbjct: 162 KLTS 165


>AL158824-8|CAI12353.1|  524|Homo sapiens ROD1 regulator of
           differentiation 1 (S. pombe) protein.
          Length = 524

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  +A  A  ++ G   Y+    +RI +S
Sbjct: 170 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 228

Query: 193 KIDS 204
           K+ S
Sbjct: 229 KLTS 232


>AL158824-5|CAI12350.1|  552|Homo sapiens ROD1 regulator of
           differentiation 1 (S. pombe) protein.
          Length = 552

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  +A  A  ++ G   Y+    +RI +S
Sbjct: 198 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 256

Query: 193 KIDS 204
           K+ S
Sbjct: 257 KLTS 260


>AL050405-1|CAB43745.1|  322|Homo sapiens hypothetical protein
           protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           +  +FSQ+G+I++I  +   KT K +G  F+ + +  S  +A+ +  G     + +R+ +
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111


>AL035423-8|CAI42444.1|  322|Homo sapiens RNA binding motif protein,
           X-linked 2 protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           +  +FSQ+G+I++I  +   KT K +G  F+ + +  S  +A+ +  G     + +R+ +
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111


>AF151837-1|AAD34074.1|  351|Homo sapiens CGI-79 protein protein.
          Length = 351

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQY 189
           +  +FSQ+G+I++I  +   KT K +G  F+ + +  S  +A+ +  G     + +R+ +
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDH 111


>AB208812-1|BAD92049.1|  338|Homo sapiens H2.0-like homeo box 1
           variant protein.
          Length = 338

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
 Frame = -3

Query: 433 IDNIIS-----EVSSGRFVKNRIWLGGCSALTLFRIPAP--GIPC 320
           ID I+S     +V  G  ++ R W GGC  LT   +P P  G+ C
Sbjct: 293 IDRILSAEFDPKVKEGNTLRGRSWAGGCRPLTTDPLPGPRAGLGC 337


>AB023967-1|BAA75466.1|  521|Homo sapiens Rod1 protein.
          Length = 521

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +1

Query: 19  LYAIFSQFGQILDIVAMKTLKMRGQAFVIFREISSATVALRSMQGFPFYDK--PMRIQYS 192
           L+ IFS+FG +L I+   T   + QA + + +  +A  A  ++ G   Y+    +RI +S
Sbjct: 167 LHQIFSKFGTVLKIITF-TKNNQFQALLQYADPVNAHYAKMALDGQNIYNACCTLRIDFS 225

Query: 193 KIDS 204
           K+ S
Sbjct: 226 KLTS 229


>X75755-1|CAA53383.1|  221|Homo sapiens PR264/SC35 protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>X62447-1|CAA44307.1|  221|Homo sapiens PR 264 protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>BT007250-1|AAP35914.1|  221|Homo sapiens splicing factor,
           arginine/serine-rich 2 protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>BC070086-1|AAH70086.1|  221|Homo sapiens splicing factor,
           arginine/serine-rich 2 protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>BC001303-1|AAH01303.1|  221|Homo sapiens SFRS2 protein protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>BC000339-1|AAH00339.1|  221|Homo sapiens SFRS2 protein protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>AK223252-1|BAD96972.1|  221|Homo sapiens splicing factor,
           arginine/serine-rich 2 variant protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>AK092489-1|BAC03903.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
           SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
          Length = 201

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 16  SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFREISSATVALRSMQGFPFYDKPMRIQ 186
           +L  +F ++G++ D+   +   T + RG AFV F +   A  A+ +M G     + +R+Q
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 187 YSK 195
            ++
Sbjct: 89  MAR 91


>U78525-1|AAC99479.1|  814|Homo sapiens eukaryotic translation
           initiation factor protein.
          Length = 814

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQIL-DIVAMKTLKMRGQAFVIFREISSATVALRSMQGF 156
           E+LK  ++ IFS+FG+I  D    +  K +G  F+ +   + A  A+++  G+
Sbjct: 201 EKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGY 253


>U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.
          Length = 873

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQIL-DIVAMKTLKMRGQAFVIFREISSATVALRSMQGF 156
           E+LK  ++ IFS+FG+I  D    +  K +G  F+ +   + A  A+++  G+
Sbjct: 201 EKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGY 253


>BC110865-1|AAI10866.1|  814|Homo sapiens eukaryotic translation
           initiation factor 3, subunit B protein.
          Length = 814

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQIL-DIVAMKTLKMRGQAFVIFREISSATVALRSMQGF 156
           E+LK  ++ IFS+FG+I  D    +  K +G  F+ +   + A  A+++  G+
Sbjct: 201 EKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGY 253


>BC009986-1|AAH09986.1|  622|Homo sapiens Unknown (protein for
           IMAGE:4124553) protein.
          Length = 622

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQIL-DIVAMKTLKMRGQAFVIFREISSATVALRSMQGF 156
           E+LK  ++ IFS+FG+I  D    +  K +G  F+ +   + A  A+++  G+
Sbjct: 10  EKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGY 62


>BC001173-1|AAH01173.1|  814|Homo sapiens EIF3S9 protein protein.
          Length = 814

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQIL-DIVAMKTLKMRGQAFVIFREISSATVALRSMQGF 156
           E+LK  ++ IFS+FG+I  D    +  K +G  F+ +   + A  A+++  G+
Sbjct: 201 EKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGY 253


>AL365412-1|CAB96956.1|  144|Homo sapiens hypothetical protein,
           similar to (NP_006139.1) LASP-1, LIM and SH3 domain
           prote protein.
          Length = 144

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 379 WLGGCSALTLFRIPAPGIPCP 317
           W+G C+A +  R+P P +P P
Sbjct: 43  WVGRCTAFSFLRLPFPSLPFP 63


>AC004971-1|AAP21880.1|  385|Homo sapiens unknown protein.
          Length = 385

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   EELKKSLYAIFSQFGQIL-DIVAMKTLKMRGQAFVIFREISSATVALRSMQGF 156
           E+LK  ++ IFS+FG+I  D    +  K +G  F+ +   + A  A+++  G+
Sbjct: 201 EKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGY 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,671,493
Number of Sequences: 237096
Number of extensions: 1843753
Number of successful extensions: 3196
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 3031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3196
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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