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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0209.Seq
         (797 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa prot...   100   5e-21
AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein.     100   5e-21
AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein.              100   5e-21
AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein.    100   5e-21
AK074718-1|BAC11159.1|  458|Homo sapiens protein ( Homo sapiens ...    31   6.4  

>BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa protein.
          Length = 1391

 Score =  100 bits (240), Expect = 5e-21
 Identities = 51/140 (36%), Positives = 80/140 (57%)
 Frame = +2

Query: 287  QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
            Q++   +QR        E  SL A++  V  + + L LW++LCEHQF +I A L  + Q 
Sbjct: 757  QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 816

Query: 467  ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
             L+  +F++L++  +E+   L+ SL+  Y+RDNA+VDGIS  L+ +CP LY   DA C +
Sbjct: 817  QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 876

Query: 647  GQRTLDCLPKQQKNPTXRGR 706
                L    +Q +N T + R
Sbjct: 877  ANELLQ-RSRQVQNKTEKER 895



 Score = 31.1 bits (67), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
           I +S KHNG+ IY  RI+  IW+   V
Sbjct: 657 IVYSGKHNGICIYFSRIMGNIWDASLV 683


>AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein.
          Length = 1391

 Score =  100 bits (240), Expect = 5e-21
 Identities = 51/140 (36%), Positives = 80/140 (57%)
 Frame = +2

Query: 287  QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
            Q++   +QR        E  SL A++  V  + + L LW++LCEHQF +I A L  + Q 
Sbjct: 757  QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 816

Query: 467  ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
             L+  +F++L++  +E+   L+ SL+  Y+RDNA+VDGIS  L+ +CP LY   DA C +
Sbjct: 817  QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 876

Query: 647  GQRTLDCLPKQQKNPTXRGR 706
                L    +Q +N T + R
Sbjct: 877  ANELLQ-RSRQVQNKTEKER 895



 Score = 31.1 bits (67), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
           I +S KHNG+ IY  RI+  IW+   V
Sbjct: 657 IVYSGKHNGICIYFSRIMGNIWDASLV 683


>AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein.
          Length = 1332

 Score =  100 bits (240), Expect = 5e-21
 Identities = 51/140 (36%), Positives = 80/140 (57%)
 Frame = +2

Query: 287  QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
            Q++   +QR        E  SL A++  V  + + L LW++LCEHQF +I A L  + Q 
Sbjct: 698  QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 757

Query: 467  ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
             L+  +F++L++  +E+   L+ SL+  Y+RDNA+VDGIS  L+ +CP LY   DA C +
Sbjct: 758  QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 817

Query: 647  GQRTLDCLPKQQKNPTXRGR 706
                L    +Q +N T + R
Sbjct: 818  ANELLQ-RSRQVQNKTEKER 836



 Score = 31.1 bits (67), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
           I +S KHNG+ IY  RI+  IW+   V
Sbjct: 598 IVYSGKHNGICIYFSRIMGNIWDASLV 624


>AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein.
          Length = 1357

 Score =  100 bits (240), Expect = 5e-21
 Identities = 51/140 (36%), Positives = 80/140 (57%)
 Frame = +2

Query: 287  QRVAAFMQRTLAPQHSEEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQN 466
            Q++   +QR        E  SL A++  V  + + L LW++LCEHQF +I A L  + Q 
Sbjct: 723  QQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQE 782

Query: 467  ALQAASFRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXDATCXQ 646
             L+  +F++L++  +E+   L+ SL+  Y+RDNA+VDGIS  L+ +CP LY   DA C +
Sbjct: 783  QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSK 842

Query: 647  GQRTLDCLPKQQKNPTXRGR 706
                L    +Q +N T + R
Sbjct: 843  ANELLQ-RSRQVQNKTEKER 861



 Score = 31.1 bits (67), Expect = 4.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 123 IEFSAKHNGLYIYVGRILLPIWNLKCV 203
           I +S KHNG+ IY  RI+  IW+   V
Sbjct: 623 IVYSGKHNGICIYFSRIMGNIWDASLV 649


>AK074718-1|BAC11159.1|  458|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90237 fis, clone NT2RM2000622. ).
          Length = 458

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
 Frame = -3

Query: 549 PATKDPRSK--HATSCRPTSNSLKLAA*RAFC*SAGRLAAIT*NWCSHSTLHRFNISIAI 376
           P   D RSK  +    R     ++ A+ R        L+ +  ++C+H T    N+  A+
Sbjct: 325 PGQMDNRSKLRNIVELRLAGLDIRDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAV 384

Query: 375 ETNNFNAFSDVYSSECCGANVRCMNAATRC 286
            T   ++ +++  S+C     +C++   RC
Sbjct: 385 GTTTRDSLTEINLSDCNKVTDQCLSFFKRC 414


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,941,161
Number of Sequences: 237096
Number of extensions: 2375074
Number of successful extensions: 10220
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10220
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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