SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C22
         (531 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69150-1|CAB56794.1|  152|Homo sapiens ribosomal protein S18 pro...   234   1e-61
BC106063-1|AAI06064.1|  152|Homo sapiens ribosomal protein S18 p...   234   1e-61
BC101788-1|AAI01789.1|  152|Homo sapiens ribosomal protein S18 p...   234   1e-61
BC101786-1|AAI01787.1|  152|Homo sapiens ribosomal protein S18 p...   234   1e-61
AL844527-17|CAI41848.1|  152|Homo sapiens ribosomal protein S18 ...   234   1e-61
AL713971-5|CAI17656.1|  152|Homo sapiens ribosomal protein S18 p...   234   1e-61
AL662827-19|CAI17530.1|  152|Homo sapiens ribosomal protein S18 ...   234   1e-61
AL662820-19|CAI18127.1|  152|Homo sapiens ribosomal protein S18 ...   234   1e-61
AL645940-16|CAI18076.1|  152|Homo sapiens ribosomal protein S18 ...   234   1e-61
AL031228-3|CAA20231.1|  152|Homo sapiens ribosomal protein S18 p...   234   1e-61
AL031228-2|CAI95617.1|   82|Homo sapiens ribosomal protein S18 p...   128   1e-29
BC071678-1|AAH71678.1|   74|Homo sapiens LOC645958 protein protein.   101   2e-21
BX248408-4|CAM26259.1|   34|Homo sapiens ribosomal protein S18 p...    52   1e-06
AY536376-1|AAT66049.1|   34|Homo sapiens rhabdomyosarcoma antige...    52   1e-06
BC130614-1|AAI30615.1| 1358|Homo sapiens KIAA1632 protein protein.     30   5.8  
BC036911-1|AAH36911.1|  464|Homo sapiens KIAA1632 protein protein.     30   5.8  
BC003695-1|AAH03695.1|  505|Homo sapiens KIAA1632 protein protein.     30   5.8  

>X69150-1|CAB56794.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>BC106063-1|AAI06064.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>BC101788-1|AAI01789.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>BC101786-1|AAI01787.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>AL844527-17|CAI41848.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>AL713971-5|CAI17656.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>AL662827-19|CAI17530.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>AL662820-19|CAI18127.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>AL645940-16|CAI18076.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>AL031228-3|CAA20231.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  234 bits (573), Expect = 1e-61
 Identities = 102/129 (79%), Positives = 122/129 (94%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEK 241
           +KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+EVE+
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVER 66

Query: 242 IITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHY 421
           +ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+
Sbjct: 67  VITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHF 126

Query: 422 WGLRVRGQH 448
           WGLRVRGQH
Sbjct: 127 WGLRVRGQH 135


>AL031228-2|CAI95617.1|   82|Homo sapiens ribosomal protein S18
           protein.
          Length = 82

 Score =  128 bits (309), Expect = 1e-29
 Identities = 54/65 (83%), Positives = 61/65 (93%)
 Frame = +2

Query: 254 MSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLR 433
           M NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLR
Sbjct: 1   MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 60

Query: 434 VRGQH 448
           VRGQH
Sbjct: 61  VRGQH 65


>BC071678-1|AAH71678.1|   74|Homo sapiens LOC645958 protein protein.
          Length = 74

 Score =  101 bits (242), Expect = 2e-21
 Identities = 43/57 (75%), Positives = 51/57 (89%)
 Frame = +2

Query: 278 IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 448
           +P WFLNRQKD+ DGKYSQ+ ++ LD+KL EDLERLKKIRA RG+RH+WGLRVRGQH
Sbjct: 1   MPAWFLNRQKDVKDGKYSQVLANGLDNKLCEDLERLKKIRARRGLRHFWGLRVRGQH 57


>BX248408-4|CAM26259.1|   34|Homo sapiens ribosomal protein S18
           protein.
          Length = 34

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIK 145
           +KFQHILR++NTNIDG+RK+ FA+TAIK
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIK 34


>AY536376-1|AAT66049.1|   34|Homo sapiens rhabdomyosarcoma antigen
           MU-RMS-40.21 protein.
          Length = 34

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = +2

Query: 62  DKFQHILRIMNTNIDGKRKVMFAMTAIK 145
           +KFQHILR++NTNIDG+RK+ FA+TAIK
Sbjct: 7   EKFQHILRVLNTNIDGRRKIAFAITAIK 34


>BC130614-1|AAI30615.1| 1358|Homo sapiens KIAA1632 protein protein.
          Length = 1358

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 276  RYQTGS*IGKRILLMVNTAS*PPPTWIQNSVKIWRGSRRFALTEGCDITGAFVCVVSTLR 455
            R+   S +   +L+M+N A+ P   +++ S++ W G +   L     +T A   + S   
Sbjct: 1139 RHMALSSLFMEVLMMMNNATIPTAEFLRGSIRTWIGQKMHGLVVLPLLTAACQSLASVRH 1198

Query: 456  LLAGEEE-LLVYQRRSKLNK 512
            +    E  +  Y + S LN+
Sbjct: 1199 MAETTEACITAYFKESPLNQ 1218


>BC036911-1|AAH36911.1|  464|Homo sapiens KIAA1632 protein protein.
          Length = 464

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 276 RYQTGS*IGKRILLMVNTAS*PPPTWIQNSVKIWRGSRRFALTEGCDITGAFVCVVSTLR 455
           R+   S +   +L+M+N A+ P   +++ S++ W G +   L     +T A   + S   
Sbjct: 147 RHMALSSLFMEVLMMMNNATIPTAEFLRGSIRTWIGQKMHGLVVLPLLTAACQSLASVRH 206

Query: 456 LLAGEEE-LLVYQRRSKLNK 512
           +    E  +  Y + S LN+
Sbjct: 207 MAETTEACITAYFKESPLNQ 226


>BC003695-1|AAH03695.1|  505|Homo sapiens KIAA1632 protein protein.
          Length = 505

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 276 RYQTGS*IGKRILLMVNTAS*PPPTWIQNSVKIWRGSRRFALTEGCDITGAFVCVVSTLR 455
           R+   S +   +L+M+N A+ P   +++ S++ W G +   L     +T A   + S   
Sbjct: 188 RHMALSSLFMEVLMMMNNATIPTAEFLRGSIRTWIGQKMHGLVVLPLLTAACQSLASVRH 247

Query: 456 LLAGEEE-LLVYQRRSKLNK 512
           +    E  +  Y + S LN+
Sbjct: 248 MAETTEACITAYFKESPLNQ 267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,279,068
Number of Sequences: 237096
Number of extensions: 1675191
Number of successful extensions: 6963
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6963
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -