Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30017
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.                  32   1.6  

>L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.
          Length = 164

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 527 TTTCTRPRTRFSLKKPARSRTLAPXTKASRSRDSTNTLAPTVSPT 661
           TT+ T   T  +   P  S T AP T    +  ++ TLAPT S T
Sbjct: 44  TTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTTLAPTTSTT 88



 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 527 TTTCTRPRTRFSLKKPARSRTLAPXTKASRSRDSTNTLAPTVSPT 661
           TT+ T   T  +   P  S TLAP T  + +  ++ T  PT S T
Sbjct: 60  TTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTT 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.314    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,903,615
Number of Sequences: 237096
Number of extensions: 1573483
Number of successful extensions: 3121
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3114
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)