Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0038
         (427 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L40693-1|AAA99344.1|  100|Homo sapiens immunoglobulin kappa chai...    30   2.8  
AY320566-1|AAQ21877.1|   77|Homo sapiens immunoglobulin kappa ch...    29   6.6  
AJ238327-1|CAB45244.1|  123|Homo sapiens immunoglobulin heavy ch...    29   8.7  

>L40693-1|AAA99344.1|  100|Homo sapiens immunoglobulin kappa chain
           protein.
          Length = 100

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 236 REAVMRFRFEGWGSRCDYTETL*LISQGVWRIYVVNVYGLQ*PLNTRWAVSSSTHL 403
           REA + +RF G GS  D+T T+  +    + +Y   +YG     N+ W     T++
Sbjct: 47  REAGIPYRFSGSGSGTDFTLTINRLEPEDFVVYYCQLYG-----NSLWTFGQGTNV 97


>AY320566-1|AAQ21877.1|   77|Homo sapiens immunoglobulin kappa chain
           variable region protein.
          Length = 77

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 257 RFEGWGSRCDYTETL*LISQGVWRIYVVNVYG 352
           RF GWGS  D+T T+  +    + +Y    YG
Sbjct: 40  RFSGWGSGTDFTLTISRLEPEDFAVYYCQQYG 71


>AJ238327-1|CAB45244.1|  123|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 123

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 183 RTSCESARVGTTAPPISAVKQ*CGFGLKGGAAVVTILRPYNLYLKVCGAFTL 338
           + SC+++    T+ P+S V+Q  G GL+    ++ I R  N   K  G  T+
Sbjct: 19  KLSCKASGDTLTSRPVSWVRQAPGQGLEWMGGIIPIFRKTNYAQKYQGRVTI 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,586,673
Number of Sequences: 237096
Number of extensions: 1340885
Number of successful extensions: 3702
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3702
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)