Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0030
(538 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 31 2.0
BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 31 2.0
BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 31 2.0
BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. 31 2.0
AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. 31 2.0
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 31 3.4
CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein. 29 7.9
AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open read... 29 7.9
>D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein.
Length = 911
Score = 31.5 bits (68), Expect = 2.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +1
Query: 199 ELFEMIPASRFYHRTGRHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 369
E E IP + +H + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 370 PERYDMSFFKRG-LW 411
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BT009799-1|AAP88801.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.5 bits (68), Expect = 2.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +1
Query: 199 ELFEMIPASRFYHRTGRHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 369
E E IP + +H + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 370 PERYDMSFFKRG-LW 411
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC020981-1|AAH20981.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 31.5 bits (68), Expect = 2.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +1
Query: 199 ELFEMIPASRFYHRTGRHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 369
E E IP + +H + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 370 PERYDMSFFKRG-LW 411
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein.
Length = 585
Score = 31.5 bits (68), Expect = 2.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +1
Query: 199 ELFEMIPASRFYHRTGRHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 369
E E IP + +H + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 370 PERYDMSFFKRG-LW 411
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein.
Length = 534
Score = 31.5 bits (68), Expect = 2.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +1
Query: 199 ELFEMIPASRFYHRTGRHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVF 369
E E IP + +H + PY + +S QR LP L+ N S T
Sbjct: 326 EFAEWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAH 383
Query: 370 PERYDMSFFKRG-LW 411
PER+D+SFF G LW
Sbjct: 384 PERWDVSFFTGGPLW 398
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 30.7 bits (66), Expect = 3.4
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 265 HPYYLEPLRSSTVRFQRSFLPRTI-RLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLG 441
H Y L ST RSFL R ++ +E+P FP + F + ++LS L
Sbjct: 746 HRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPSSREHHSFLKLCLKLLSNHLALA 805
Query: 442 SAPGIA-EVHGRR 477
A G+A + GR+
Sbjct: 806 LAGGVATSILGRQ 818
>CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein.
Length = 2151
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 218 GIISNNSSEHSPWNIRYKIQREPKSLRKPRGSIHTISQ 105
GI+++ + SP + Y +Q+E K +R+ + HTISQ
Sbjct: 1381 GILNHAEKQQSPEVLDYMLQKEEKYIRQQKA--HTISQ 1416
>AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open reading
frame 30 protein.
Length = 2151
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 218 GIISNNSSEHSPWNIRYKIQREPKSLRKPRGSIHTISQ 105
GI+++ + SP + Y +Q+E K +R+ + HTISQ
Sbjct: 1381 GILNHAEKQQSPEVLDYMLQKEEKYIRQQKA--HTISQ 1416
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,087,190
Number of Sequences: 237096
Number of extensions: 2269852
Number of successful extensions: 5420
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5420
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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