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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0040
         (431 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens ...    33   0.55 
AK097452-1|BAC05058.1|  225|Homo sapiens protein ( Homo sapiens ...    32   0.73 
AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens ...    31   2.2  
AK023742-1|BAB14664.1| 1081|Homo sapiens protein ( Homo sapiens ...    31   2.2  
AK124784-1|BAC85948.1|  218|Homo sapiens protein ( Homo sapiens ...    30   3.9  
BT007311-1|AAP35975.1|  693|Homo sapiens G protein-coupled recep...    29   5.1  
BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and pol...    29   5.1  
BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and pol...    29   5.1  
BC008770-1|AAH08770.1|  693|Homo sapiens G protein-coupled recep...    29   5.1  
AY358400-1|AAQ88766.1|  693|Homo sapiens GPR56 protein.                29   5.1  
AJ011001-1|CAB37294.1|  687|Homo sapiens TM7XN1 protein protein.       29   5.1  
AF106858-1|AAD30545.1|  693|Homo sapiens G-protein-coupled recep...    29   5.1  
AF046935-1|AAC03107.1|  725|Homo sapiens PCF11p homolog protein.       29   5.1  
AB065909-1|BAC06124.1|  693|Homo sapiens seven transmembrane hel...    29   5.1  
AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein.     29   5.1  
BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein.     29   9.0  
BC117205-1|AAI17206.1| 1101|Homo sapiens KIAA0913 protein protein.     29   9.0  
BC063694-1|AAH63694.1|  230|Homo sapiens KIAA0913 protein protein.     29   9.0  
BC040726-1|AAH40726.1|  349|Homo sapiens KIAA0913 protein protein.     29   9.0  
AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).  pr...    29   9.0  

>AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45698 fis, clone FEBRA2017811. ).
          Length = 415

 Score = 32.7 bits (71), Expect = 0.55
 Identities = 23/69 (33%), Positives = 34/69 (49%)
 Frame = -1

Query: 221 IRLHSITREHIQNLSTLGSHTTE*QRTTHSRLYTTTQDNSRKTQTQLHTHTIYTQL*KTQ 42
           I +HS T  HI    TL    T+    TH+ ++     ++R T T +HTHT+      TQ
Sbjct: 161 IHIHSDTHLHIYT-HTLTCTQTQIHTCTHTHIHIHMPTHTR-TYTHMHTHTLTC----TQ 214

Query: 41  IEYASFIYL 15
           I   + IY+
Sbjct: 215 IHIYTHIYM 223


>AK097452-1|BAC05058.1|  225|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40133 fis, clone TESTI2012231. ).
          Length = 225

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 222 HSPSLHHSRTHPKPFHLRFTHDGITTHNS 136
           HSP++H++ TH    H  +TH   TTH +
Sbjct: 25  HSPTIHNTHTHHSHTHTIWTHHTHTTHTT 53



 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = -1

Query: 203 TREHIQNLSTLGSHTTE*QRTTHSRLYTTTQDNSRKTQTQLHTHTIYTQL*KTQIEYAS 27
           T  H  +  T+ +H T    TTH   Y      +    T  H HT  T   +T I + S
Sbjct: 32  THTHHSHTHTIWTHHTHTTHTTHINSYKAFTHTTHTPLTSTHLHTPLTHTPRTHITHHS 90


>AK123631-1|BAC85667.1|  207|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41637 fis, clone FEBRA1000030, weakly  similar
           to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
          Length = 207

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -2

Query: 178 PP*VHTRRNNNAQL-IPAYTQQHRTIHAKHKHNYTHT 71
           P   HT  + +A   +P YT  H    + H H +THT
Sbjct: 28  PTHTHTHTHTHAHCPVPPYTHAHAVCTSLHTHTHTHT 64


>AK023742-1|BAB14664.1| 1081|Homo sapiens protein ( Homo sapiens cDNA
            FLJ13680 fis, clone PLACE2000007, highly similar to Homo
            sapiens mRNA for KIAA0913 protein. ).
          Length = 1081

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -3

Query: 336  FVTDLIGSIDVSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKP 181
            FV   I    + R+S   A    R  A  +L QRC Q +   +HHS  H  P
Sbjct: 974  FVLQEIVMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHSLIHLTP 1025


>AK124784-1|BAC85948.1|  218|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42794 fis, clone BRAWH3007783. ).
          Length = 218

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -1

Query: 212 HSITREHIQNLSTLGSH--TTE*QRTT--HSRLYTTTQDNSRKTQTQLHTHT 69
           H+ T+ H+    T G+H  TT  + TT  H++ +T T       QTQLHT +
Sbjct: 117 HTGTQTHMHTHHT-GTHLCTTHHRHTTQAHTQAHTCTHHTGTHRQTQLHTRS 167


>BT007311-1|AAP35975.1|  693|Homo sapiens G protein-coupled receptor
           56 protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -3

Query: 291 VEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKPFHLRFTHDGITTHNSFPLIH 121
           V+ A   G     R   QR  QTH  SLH+  T      +  + + +T H  FP  H
Sbjct: 20  VQGAHGRGHREDFRFCSQR-NQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAH 75


>BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and
           polyadenylation factor subunit, homolog (S. cerevisiae)
           protein.
          Length = 1555

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 351 GHKKLFVTDLIGSID-VSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLH 205
           G +   +  ++   D ++  S +Q  +PGR + R+R + R  ++ SP +H
Sbjct: 444 GSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIH 493


>BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and
           polyadenylation factor subunit, homolog (S. cerevisiae)
           protein.
          Length = 1555

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 351 GHKKLFVTDLIGSID-VSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLH 205
           G +   +  ++   D ++  S +Q  +PGR + R+R + R  ++ SP +H
Sbjct: 444 GSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIH 493


>BC008770-1|AAH08770.1|  693|Homo sapiens G protein-coupled receptor
           56 protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -3

Query: 291 VEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKPFHLRFTHDGITTHNSFPLIH 121
           V+ A   G     R   QR  QTH  SLH+  T      +  + + +T H  FP  H
Sbjct: 20  VQGAHGRGHREDFRFCSQR-NQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAH 75


>AY358400-1|AAQ88766.1|  693|Homo sapiens GPR56 protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -3

Query: 291 VEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKPFHLRFTHDGITTHNSFPLIH 121
           V+ A   G     R   QR  QTH  SLH+  T      +  + + +T H  FP  H
Sbjct: 20  VQGAHGRGHREDFRFCSQR-NQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAH 75


>AJ011001-1|CAB37294.1|  687|Homo sapiens TM7XN1 protein protein.
          Length = 687

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -3

Query: 291 VEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKPFHLRFTHDGITTHNSFPLIH 121
           V+ A   G     R   QR  QTH  SLH+  T      +  + + +T H  FP  H
Sbjct: 20  VQGAHGRGHREDFRFCSQR-NQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAH 75


>AF106858-1|AAD30545.1|  693|Homo sapiens G-protein-coupled receptor
           protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -3

Query: 291 VEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKPFHLRFTHDGITTHNSFPLIH 121
           V+ A   G     R   QR  QTH  SLH+  T      +  + + +T H  FP  H
Sbjct: 20  VQGAHGRGHREDFRFCSQR-NQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAH 75


>AF046935-1|AAC03107.1|  725|Homo sapiens PCF11p homolog protein.
          Length = 725

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 351 GHKKLFVTDLIGSID-VSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLH 205
           G +   +  ++   D ++  S +Q  +PGR + R+R + R  ++ SP +H
Sbjct: 444 GSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIH 493


>AB065909-1|BAC06124.1|  693|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -3

Query: 291 VEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKPFHLRFTHDGITTHNSFPLIH 121
           V+ A   G     R   QR  QTH  SLH+  T      +  + + +T H  FP  H
Sbjct: 20  VQGAHGRGHREDFRFCSQR-NQTHRSSLHYKPTPDLRISIENSEEALTVHAPFPAAH 75


>AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein.
          Length = 1644

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 351 GHKKLFVTDLIGSID-VSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLH 205
           G +   +  ++   D ++  S +Q  +PGR + R+R + R  ++ SP +H
Sbjct: 533 GSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIH 582


>BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein.
          Length = 1837

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -3

Query: 336  FVTDLIGSIDVSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKP 181
            FV   I    + R+S   A    R  A  +L QRC Q +   +HH   H  P
Sbjct: 1730 FVLQEIVMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTP 1781


>BC117205-1|AAI17206.1| 1101|Homo sapiens KIAA0913 protein protein.
          Length = 1101

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -3

Query: 336  FVTDLIGSIDVSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKP 181
            FV   I    + R+S   A    R  A  +L QRC Q +   +HH   H  P
Sbjct: 994  FVLQEIVMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTP 1045


>BC063694-1|AAH63694.1|  230|Homo sapiens KIAA0913 protein protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -3

Query: 336 FVTDLIGSIDVSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKP 181
           FV   I    + R+S   A    R  A  +L QRC Q +   +HH   H  P
Sbjct: 123 FVLQEIVMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTP 174


>BC040726-1|AAH40726.1|  349|Homo sapiens KIAA0913 protein protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -3

Query: 336 FVTDLIGSIDVSRVSVEQAREPGRVTARRRLQQRCGQTHSPSLHHSRTHPKP 181
           FV   I    + R+S   A    R  A  +L QRC Q +   +HH   H  P
Sbjct: 242 FVLQEIVMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTP 293


>AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).
           protein.
          Length = 377

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = -3

Query: 306 VSRVSVEQAREPGRVTARRRLQQR-CGQT--HSPSLHHSRTHPKPFHLRFTHDGITTHNS 136
           +SR S   A      +   +L  R C  T  H+P   HSRTHP       TH  + +H  
Sbjct: 295 ISRYSAPHAHTCSHTSHITQLHTRPCSHTCAHTPHTIHSRTHP------LTHAHVCSHTC 348

Query: 135 FPL 127
            P+
Sbjct: 349 SPI 351


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,938,051
Number of Sequences: 237096
Number of extensions: 789680
Number of successful extensions: 2074
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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