SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0002
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.              303   3e-82
BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.      303   3e-82
AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.             303   3e-82
AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase...   302   6e-82
Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A synth...   136   9e-32
U18197-1|AAB60340.1| 1101|Homo sapiens ATP:citrate lyase protein.      41   0.005
BC006195-1|AAH06195.1| 1101|Homo sapiens ATP citrate lyase protein.    41   0.005
AK095084-1|BAC04484.1|  701|Homo sapiens  mRNA.  protein.              41   0.005
AB210035-1|BAE06117.1| 1137|Homo sapiens ACLY variant protein pr...    41   0.005
X64330-1|CAA45614.1| 1105|Homo sapiens ATP-citrate (pro-S-)-lyas...    39   0.020
Z98744-5|CAB11421.1|  226|Homo sapiens histone 1, H1b protein.         30   6.9  
X83509-1|CAA58498.1|  226|Homo sapiens Histone H1.5 protein.           30   6.9  
BC104184-1|AAI04185.1|  199|Homo sapiens KIAA1644 protein protein.     30   6.9  
BC104183-1|AAI04184.1|  199|Homo sapiens KIAA1644 protein protein.     30   6.9  
BC101583-1|AAI01584.1|  226|Homo sapiens histone cluster 1, H1b ...    30   6.9  
BC101581-1|AAI01582.1|  226|Homo sapiens histone cluster 1, H1b ...    30   6.9  
BC069101-1|AAH69101.1|  226|Homo sapiens histone cluster 1, H1b ...    30   6.9  
AL591914-1|CAM28349.1|  199|Homo sapiens protein ( Human DNA seq...    30   6.9  
AL022339-1|CAI41964.2|  199|Homo sapiens protein ( Human DNA seq...    30   6.9  
AF531304-1|AAN06704.1|  226|Homo sapiens histone H1 protein.           30   6.9  

>CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.
          Length = 333

 Score =  303 bits (745), Expect = 3e-82
 Identities = 138/197 (70%), Positives = 157/197 (79%)
 Frame = +2

Query: 110 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 289
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 290 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 469
           TVKEAK  TGATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90  TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149

Query: 470 NKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGQTL 649
            K+RL+GPNCPG+I P +CKIGIMP  +HK+G IG+VSRSGTLTYEA HQTT  GLGQ+L
Sbjct: 150 EKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSL 209

Query: 650 CVGIGGDPFNGTDFIDC 700
           CVGIGGDPFNGTDFIDC
Sbjct: 210 CVGIGGDPFNGTDFIDC 226


>BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.
          Length = 333

 Score =  303 bits (745), Expect = 3e-82
 Identities = 138/197 (70%), Positives = 157/197 (79%)
 Frame = +2

Query: 110 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 289
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 290 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 469
           TVKEAK  TGATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90  TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149

Query: 470 NKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGQTL 649
            K+RL+GPNCPG+I P +CKIGIMP  +HK+G IG+VSRSGTLTYEA HQTT  GLGQ+L
Sbjct: 150 EKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSL 209

Query: 650 CVGIGGDPFNGTDFIDC 700
           CVGIGGDPFNGTDFIDC
Sbjct: 210 CVGIGGDPFNGTDFIDC 226


>AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.
          Length = 333

 Score =  303 bits (745), Expect = 3e-82
 Identities = 138/197 (70%), Positives = 157/197 (79%)
 Frame = +2

Query: 110 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 289
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 290 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 469
           TVKEAK  TGATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90  TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149

Query: 470 NKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGQTL 649
            K+RL+GPNCPG+I P +CKIGIMP  +HK+G IG+VSRSGTLTYEA HQTT  GLGQ+L
Sbjct: 150 EKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSL 209

Query: 650 CVGIGGDPFNGTDFIDC 700
           CVGIGGDPFNGTDFIDC
Sbjct: 210 CVGIGGDPFNGTDFIDC 226


>AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase
           alpha subunit protein.
          Length = 333

 Score =  302 bits (742), Expect = 6e-82
 Identities = 138/197 (70%), Positives = 156/197 (79%)
 Frame = +2

Query: 110 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 289
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG  P K G  HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFN 89

Query: 290 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 469
           TVKEAK  TGATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ
Sbjct: 90  TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQ 149

Query: 470 NKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGQTL 649
            K+RL+GPNCPG+I P +CKIGIMP  +HK+G IG+VSRSGTLTYEA HQTT  GLGQ+L
Sbjct: 150 EKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSL 209

Query: 650 CVGIGGDPFNGTDFIDC 700
           CVGIGGDPFNGTDFIDC
Sbjct: 210 CVGIGGDPFNGTDFIDC 226


>Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A
           synthetase protein.
          Length = 132

 Score =  136 bits (328), Expect = 9e-32
 Identities = 64/103 (62%), Positives = 74/103 (71%)
 Frame = +2

Query: 110 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 289
           Y  +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K G  HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 290 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITE 418
           TVKEAK  TGATASVIYVPPP             +PL+VCITE
Sbjct: 90  TVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITE 132


>U18197-1|AAB60340.1| 1101|Homo sapiens ATP:citrate lyase protein.
          Length = 1101

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
 Frame = +2

Query: 401 IVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAVH 556
           I  I EG+P+  + R       Q    ++GP   G I P   KIG        I+ + ++
Sbjct: 594 IAIIAEGIPEA-LTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLY 652

Query: 557 KRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFID 697
           + G +  VSRSG ++ E  +  + T  G    V IGGD + G+ F+D
Sbjct: 653 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMD 699


>BC006195-1|AAH06195.1| 1101|Homo sapiens ATP citrate lyase protein.
          Length = 1101

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
 Frame = +2

Query: 401 IVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAVH 556
           I  I EG+P+  + R       Q    ++GP   G I P   KIG        I+ + ++
Sbjct: 594 IAIIAEGIPEA-LTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLY 652

Query: 557 KRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFID 697
           + G +  VSRSG ++ E  +  + T  G    V IGGD + G+ F+D
Sbjct: 653 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMD 699


>AK095084-1|BAC04484.1|  701|Homo sapiens  mRNA.  protein.
          Length = 701

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
 Frame = +2

Query: 401 IVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAVH 556
           I  I EG+P+  + R       Q    ++GP   G I P   KIG        I+ + ++
Sbjct: 194 IAIIAEGIPEA-LTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLY 252

Query: 557 KRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFID 697
           + G +  VSRSG ++ E  +  + T  G    V IGGD + G+ F+D
Sbjct: 253 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMD 299


>AB210035-1|BAE06117.1| 1137|Homo sapiens ACLY variant protein
           protein.
          Length = 1137

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
 Frame = +2

Query: 401 IVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAVH 556
           I  I EG+P+  + R       Q    ++GP   G I P   KIG        I+ + ++
Sbjct: 630 IAIIAEGIPEA-LTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLY 688

Query: 557 KRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFID 697
           + G +  VSRSG ++ E  +  + T  G    V IGGD + G+ F+D
Sbjct: 689 RPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMD 735


>X64330-1|CAA45614.1| 1105|Homo sapiens ATP-citrate (pro-S-)-lyase
           protein.
          Length = 1105

 Score = 38.7 bits (86), Expect = 0.020
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
 Frame = +2

Query: 401 IVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAVH 556
           I  I EG+P+  + R       Q    ++GP   G I P   KIG        I+ + ++
Sbjct: 598 IAIIAEGIPEA-LTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLY 656

Query: 557 KRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFID 697
            +  +  VSRSG ++ E  +  + T  G    V IGGD + G+ F+D
Sbjct: 657 PQAAVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMD 703


>Z98744-5|CAB11421.1|  226|Homo sapiens histone 1, H1b protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 27/99 (27%), Positives = 37/99 (37%)
 Frame = +2

Query: 50  LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 229
           L+  K  L  G       N   +     +++  T V  +G TG  G+F   +    G   
Sbjct: 62  LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118

Query: 230 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 346
                 KKAG     KP   T K+AK   GA  +V   P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156


>X83509-1|CAA58498.1|  226|Homo sapiens Histone H1.5 protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 27/99 (27%), Positives = 37/99 (37%)
 Frame = +2

Query: 50  LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 229
           L+  K  L  G       N   +     +++  T V  +G TG  G+F   +    G   
Sbjct: 62  LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118

Query: 230 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 346
                 KKAG     KP   T K+AK   GA  +V   P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156


>BC104184-1|AAI04185.1|  199|Homo sapiens KIAA1644 protein protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 595 CPRTRYNSDATTFVHCSWHDTNFTLLRSNDTRTVRTNQSRLVLSQEGMFYSHHIML 428
           CPR    SD  TF+ C  H+        N+T      Q+ L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


>BC104183-1|AAI04184.1|  199|Homo sapiens KIAA1644 protein protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 595 CPRTRYNSDATTFVHCSWHDTNFTLLRSNDTRTVRTNQSRLVLSQEGMFYSHHIML 428
           CPR    SD  TF+ C  H+        N+T      Q+ L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


>BC101583-1|AAI01584.1|  226|Homo sapiens histone cluster 1, H1b
           protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 27/99 (27%), Positives = 37/99 (37%)
 Frame = +2

Query: 50  LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 229
           L+  K  L  G       N   +     +++  T V  +G TG  G+F   +    G   
Sbjct: 62  LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118

Query: 230 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 346
                 KKAG     KP   T K+AK   GA  +V   P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156


>BC101581-1|AAI01582.1|  226|Homo sapiens histone cluster 1, H1b
           protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 27/99 (27%), Positives = 37/99 (37%)
 Frame = +2

Query: 50  LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 229
           L+  K  L  G       N   +     +++  T V  +G TG  G+F   +    G   
Sbjct: 62  LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118

Query: 230 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 346
                 KKAG     KP   T K+AK   GA  +V   P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156


>BC069101-1|AAH69101.1|  226|Homo sapiens histone cluster 1, H1b
           protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 27/99 (27%), Positives = 37/99 (37%)
 Frame = +2

Query: 50  LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 229
           L+  K  L  G       N   +     +++  T V  +G TG  G+F   +    G   
Sbjct: 62  LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118

Query: 230 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 346
                 KKAG     KP   T K+AK   GA  +V   P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156


>AL591914-1|CAM28349.1|  199|Homo sapiens protein ( Human DNA
           sequence from clone CITF22-4H11 on chromosome 22. ).
          Length = 199

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 595 CPRTRYNSDATTFVHCSWHDTNFTLLRSNDTRTVRTNQSRLVLSQEGMFYSHHIML 428
           CPR    SD  TF+ C  H+        N+T      Q+ L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


>AL022339-1|CAI41964.2|  199|Homo sapiens protein ( Human DNA
           sequence from clone LL22NC03-75B3 on chromosome 22. ).
          Length = 199

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -1

Query: 595 CPRTRYNSDATTFVHCSWHDTNFTLLRSNDTRTVRTNQSRLVLSQEGMFYSHHIML 428
           CPR    SD  TF+ C  H+        N+T      Q+ L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


>AF531304-1|AAN06704.1|  226|Homo sapiens histone H1 protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 27/99 (27%), Positives = 37/99 (37%)
 Frame = +2

Query: 50  LSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKV 229
           L+  K  L  G       N   +     +++  T V  +G TG  G+F   +    G   
Sbjct: 62  LAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKG-TGASGSFKLNKKAASGE-- 118

Query: 230 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVIYVP 346
                 KKAG     KP   T K+AK   GA  +V   P
Sbjct: 119 -AKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTP 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,640,908
Number of Sequences: 237096
Number of extensions: 2328894
Number of successful extensions: 5118
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5112
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -