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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0043
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047932-1|AAH47932.1|  437|Homo sapiens vacuolar protein sortin...   148   2e-35
AF282903-1|AAG01470.1|  437|Homo sapiens vacuolar protein sortin...   148   2e-35
AF255952-1|AAK52408.1|  437|Homo sapiens vacuolar protein sortin...   148   2e-35
AF159063-1|AAD49227.1|  437|Homo sapiens SKD1-homolog protein.        148   2e-35
AF112215-1|AAF17203.1|  437|Homo sapiens SKD1 protein protein.        148   2e-35
AF155740-1|AAD42971.1|  432|Homo sapiens vacuolar sorting protei...   144   2e-34
BC039574-1|AAH39574.1|  444|Homo sapiens vacuolar protein sortin...   132   2e-30
AY232629-1|AAP59551.1|  444|Homo sapiens cell migration-inducing...   132   2e-30
AF282904-1|AAG01471.1|  444|Homo sapiens vacuolar protein sortin...   132   2e-30
AF195514-1|AAG33022.1|  444|Homo sapiens VPS4-2 ATPase protein.       132   2e-30
AF132747-1|AAL75948.1|  437|Homo sapiens SKD2 protein protein.        128   2e-29
BC009692-1|AAH09692.1|   81|Homo sapiens VPS4B protein protein.       105   1e-22
BC004540-1|AAH04540.1|  541|Homo sapiens RPS6KL1 protein protein.      42   0.002
AC006530-3|AAD30182.1|  549|Homo sapiens unknown protein.              42   0.002
BC056202-1|AAH56202.1|  813|Homo sapiens calpain 7 protein.            40   0.010
AB028639-1|BAA78730.1|  813|Homo sapiens PalBH protein.                40   0.010
BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6 ki...    39   0.017
AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6 ki...    39   0.017
AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6 ki...    39   0.017
AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6 ki...    39   0.017
AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6 ki...    39   0.017
AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6 ki...    39   0.017
AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6 ki...    39   0.017
AK054800-1|BAB70808.1|  255|Homo sapiens protein ( Homo sapiens ...    39   0.017
AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein.     39   0.017
AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein.     38   0.051
BC034999-1|AAH34999.2|  466|Homo sapiens katanin p60 subunit A-l...    33   1.1  
BC150260-1|AAI50261.1|  584|Homo sapiens spastin protein.              30   7.7  
AJ246003-1|CAB60208.1|  616|Homo sapiens spastin protein protein.      30   7.7  
AJ246001-1|CAB60141.1|  616|Homo sapiens spastin protein protein.      30   7.7  
AB029006-1|BAA83035.1|  584|Homo sapiens KIAA1083 protein protein.     30   7.7  

>BC047932-1|AAH47932.1|  437|Homo sapiens vacuolar protein sorting 4
           homolog A (S. cerevisiae) protein.
          Length = 437

 Score =  148 bits (359), Expect = 2e-35
 Identities = 84/181 (46%), Positives = 101/181 (55%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA  ++AKESIRAK
Sbjct: 1   MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59

Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
           C+QYLDRA                                         LQ +L GA+V+
Sbjct: 60  CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119

Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
           EKP+++W+DV G           VILPIKF      +     G +++  P      YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178

Query: 691 A 693
           A
Sbjct: 179 A 179



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191


>AF282903-1|AAG01470.1|  437|Homo sapiens vacuolar protein sorting
           factor 4A protein.
          Length = 437

 Score =  148 bits (359), Expect = 2e-35
 Identities = 84/181 (46%), Positives = 101/181 (55%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA  ++AKESIRAK
Sbjct: 1   MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59

Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
           C+QYLDRA                                         LQ +L GA+V+
Sbjct: 60  CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119

Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
           EKP+++W+DV G           VILPIKF      +     G +++  P      YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178

Query: 691 A 693
           A
Sbjct: 179 A 179



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191


>AF255952-1|AAK52408.1|  437|Homo sapiens vacuolar protein sorting
           VPS4-1 protein.
          Length = 437

 Score =  148 bits (359), Expect = 2e-35
 Identities = 84/181 (46%), Positives = 101/181 (55%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA  ++AKESIRAK
Sbjct: 1   MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59

Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
           C+QYLDRA                                         LQ +L GA+V+
Sbjct: 60  CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119

Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
           EKP+++W+DV G           VILPIKF      +     G +++  P      YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178

Query: 691 A 693
           A
Sbjct: 179 A 179



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191


>AF159063-1|AAD49227.1|  437|Homo sapiens SKD1-homolog protein.
          Length = 437

 Score =  148 bits (359), Expect = 2e-35
 Identities = 84/181 (46%), Positives = 101/181 (55%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA  ++AKESIRAK
Sbjct: 1   MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59

Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
           C+QYLDRA                                         LQ +L GA+V+
Sbjct: 60  CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119

Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
           EKP+++W+DV G           VILPIKF      +     G +++  P      YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178

Query: 691 A 693
           A
Sbjct: 179 A 179



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191


>AF112215-1|AAF17203.1|  437|Homo sapiens SKD1 protein protein.
          Length = 437

 Score =  148 bits (359), Expect = 2e-35
 Identities = 84/181 (46%), Positives = 101/181 (55%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA  ++AKESIRAK
Sbjct: 1   MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59

Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
           C+QYLDRA                                         LQ +L GA+V+
Sbjct: 60  CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119

Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
           EKP+++W+DV G           VILPIKF      +     G +++  P      YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178

Query: 691 A 693
           A
Sbjct: 179 A 179



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191


>AF155740-1|AAD42971.1|  432|Homo sapiens vacuolar sorting protein 4
           protein.
          Length = 432

 Score =  144 bits (350), Expect = 2e-34
 Identities = 80/175 (45%), Positives = 96/175 (54%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           LQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA  ++AKESIRAKC+QYLD
Sbjct: 1   LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLD 60

Query: 349 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 528
           RA                                         LQ +L GA+V+EKP+++
Sbjct: 61  RAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIR 120

Query: 529 WSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAKA 693
           W+DV G           VILPIKF      +     G +++  P      YLAKA
Sbjct: 121 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAKA 174



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 144 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 186


>BC039574-1|AAH39574.1|  444|Homo sapiens vacuolar protein sorting 4
           homolog B (S. cerevisiae) protein.
          Length = 444

 Score =  132 bits (318), Expect = 2e-30
 Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
 Frame = +1

Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
           ++S  LQKAIDL +KA +EDK  NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3   STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62

Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
            +YLDRA                                              LQ +L+G
Sbjct: 63  TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122

Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
           AIV+E+P+VKWSDV G           VILPIKF      +     G +++  P      
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181

Query: 679 YLAKA 693
           YLAKA
Sbjct: 182 YLAKA 186



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198


>AY232629-1|AAP59551.1|  444|Homo sapiens cell migration-inducing 1
           protein.
          Length = 444

 Score =  132 bits (318), Expect = 2e-30
 Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
 Frame = +1

Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
           ++S  LQKAIDL +KA +EDK  NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3   STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62

Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
            +YLDRA                                              LQ +L+G
Sbjct: 63  TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122

Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
           AIV+E+P+VKWSDV G           VILPIKF      +     G +++  P      
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181

Query: 679 YLAKA 693
           YLAKA
Sbjct: 182 YLAKA 186



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198


>AF282904-1|AAG01471.1|  444|Homo sapiens vacuolar protein sorting
           factor 4B protein.
          Length = 444

 Score =  132 bits (318), Expect = 2e-30
 Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
 Frame = +1

Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
           ++S  LQKAIDL +KA +EDK  NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3   STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62

Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
            +YLDRA                                              LQ +L+G
Sbjct: 63  TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122

Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
           AIV+E+P+VKWSDV G           VILPIKF      +     G +++  P      
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181

Query: 679 YLAKA 693
           YLAKA
Sbjct: 182 YLAKA 186



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198


>AF195514-1|AAG33022.1|  444|Homo sapiens VPS4-2 ATPase protein.
          Length = 444

 Score =  132 bits (318), Expect = 2e-30
 Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
 Frame = +1

Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
           ++S  LQKAIDL +KA +EDK  NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3   STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62

Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
            +YLDRA                                              LQ +L+G
Sbjct: 63  TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122

Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
           AIV+E+P+VKWSDV G           VILPIKF      +     G +++  P      
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181

Query: 679 YLAKA 693
           YLAKA
Sbjct: 182 YLAKA 186



 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGKR PW+GILLF  P     +  + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198


>AF132747-1|AAL75948.1|  437|Homo sapiens SKD2 protein protein.
          Length = 437

 Score =  128 bits (310), Expect = 2e-29
 Identities = 82/181 (45%), Positives = 95/181 (52%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA  ++AKESIRAK
Sbjct: 1   MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59

Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
           C+QYLDRA                                         LQ +L GA+V+
Sbjct: 60  CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119

Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
           EKP                    VILPIKF      + +   G+L+   P    S YLAK
Sbjct: 120 EKPQHTVERRGRAGGAKEALKEAVILPIKFPHLFTGKTHPGGGYLLFGPPGTGKS-YLAK 178

Query: 691 A 693
           A
Sbjct: 179 A 179



 Score = 41.9 bits (94), Expect = 0.002
 Identities = 24/44 (54%), Positives = 27/44 (61%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FPHLFTGK  P  G LLF  P     +  + + ATEA NSTFFS
Sbjct: 149 FPHLFTGKTHPGGGYLLFGPPGTGKSYLAKAV-ATEATNSTFFS 191


>BC009692-1|AAH09692.1|   81|Homo sapiens VPS4B protein protein.
          Length = 81

 Score =  105 bits (253), Expect = 1e-22
 Identities = 47/67 (70%), Positives = 58/67 (86%)
 Frame = +1

Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
           ++S  LQKAIDL +KA +EDK  NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3   STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62

Query: 334 LQYLDRA 354
            +YLDRA
Sbjct: 63  TEYLDRA 69


>BC004540-1|AAH04540.1|  541|Homo sapiens RPS6KL1 protein protein.
          Length = 541

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT  + L  A   +  A E D +++YE A   Y++GV+  L  +  +   ER +E+++ K
Sbjct: 44  MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102

Query: 331 CLQYLDRA 354
             +YL RA
Sbjct: 103 ITKYLRRA 110


>AC006530-3|AAD30182.1|  549|Homo sapiens unknown protein.
          Length = 549

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT  + L  A   +  A E D +++YE A   Y++GV+  L  +  +   ER +E+++ K
Sbjct: 44  MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102

Query: 331 CLQYLDRA 354
             +YL RA
Sbjct: 103 ITKYLRRA 110


>BC056202-1|AAH56202.1|  813|Homo sapiens calpain 7 protein.
          Length = 813

 Score = 39.9 bits (89), Expect = 0.010
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L++A  LVT+A +ED+ +N E+A+ LY   V+  L    YE   +  +  ++    Q LD
Sbjct: 87  LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145

Query: 349 RA 354
           RA
Sbjct: 146 RA 147


>AB028639-1|BAA78730.1|  813|Homo sapiens PalBH protein.
          Length = 813

 Score = 39.9 bits (89), Expect = 0.010
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L++A  LVT+A +ED+ +N E+A+ LY   V+  L    YE   +  +  ++    Q LD
Sbjct: 87  LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145

Query: 349 RA 354
           RA
Sbjct: 146 RA 147


>BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6
           kinase, 52kDa, polypeptide 1 protein.
          Length = 1066

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298

Query: 349 RA 354
           RA
Sbjct: 299 RA 300


>AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6
           kinase, 52kDa, polypeptide 1 protein.
          Length = 1054

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286

Query: 349 RA 354
           RA
Sbjct: 287 RA 288


>AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6
           kinase, 52kDa, polypeptide 1 protein.
          Length = 1066

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298

Query: 349 RA 354
           RA
Sbjct: 299 RA 300


>AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6
           kinase, 52kDa, polypeptide 1 protein.
          Length = 1054

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286

Query: 349 RA 354
           RA
Sbjct: 287 RA 288


>AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6
           kinase, 52kDa, polypeptide 1 protein.
          Length = 1066

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298

Query: 349 RA 354
           RA
Sbjct: 299 RA 300


>AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6
           kinase, 52kDa, polypeptide 1 protein.
          Length = 1054

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286

Query: 349 RA 354
           RA
Sbjct: 287 RA 288


>AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6
           kinase, 52kDa, polypeptide 1 protein.
          Length = 1066

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298

Query: 349 RA 354
           RA
Sbjct: 299 RA 300


>AK054800-1|BAB70808.1|  255|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30238 fis, clone BRACE2002050. ).
          Length = 255

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = +1

Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
           MT  + L  A   +  A E   +++YE A   Y++GV+  L  +  +   ER +E+++ K
Sbjct: 44  MTKRDYLVDAATQIRLALERGVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102

Query: 331 CLQYLDRA 354
             +YL RA
Sbjct: 103 ITKYLRRA 110


>AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein.
          Length = 1066

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 20/62 (32%), Positives = 37/62 (59%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+  A ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298

Query: 349 RA 354
           RA
Sbjct: 299 RA 300


>AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein.
          Length = 1066

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           L+KA +L+    ++++  +YE A   Y  GV+  L  V+ E+   R +E+++ +  +YL 
Sbjct: 240 LEKAGELIKLVLKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298

Query: 349 RA 354
           RA
Sbjct: 299 RA 300


>BC034999-1|AAH34999.2|  466|Homo sapiens katanin p60 subunit A-like
           2 protein.
          Length = 466

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 587 YQ*NFPHLFTGKRIPWKGILLFWTP 661
           Y   +P LFTG   PWKG+LL+  P
Sbjct: 200 YPIRYPQLFTGILSPWKGLLLYGPP 224


>BC150260-1|AAI50261.1|  584|Homo sapiens spastin protein.
          Length = 584

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           P LFTG R P +G+LLF  P      T         +N+TFF+
Sbjct: 333 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 373


>AJ246003-1|CAB60208.1|  616|Homo sapiens spastin protein protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           P LFTG R P +G+LLF  P      T         +N+TFF+
Sbjct: 365 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 405


>AJ246001-1|CAB60141.1|  616|Homo sapiens spastin protein protein.
          Length = 616

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           P LFTG R P +G+LLF  P      T         +N+TFF+
Sbjct: 365 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 405


>AB029006-1|BAA83035.1|  584|Homo sapiens KIAA1083 protein protein.
          Length = 584

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           P LFTG R P +G+LLF  P      T         +N+TFF+
Sbjct: 333 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 373


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,854,619
Number of Sequences: 237096
Number of extensions: 1736459
Number of successful extensions: 3753
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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