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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0034
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03559-1|CAA27246.1|  539|Homo sapiens protein ( Human mRNA for ...   105   2e-22
M27132-1|AAA51809.1|  529|Homo sapiens ATP synthase beta subunit...   105   2e-22
D00022-1|BAA00016.1|  539|Homo sapiens F1 beta subunit protein.       105   2e-22
DQ403107-1|ABD77240.1|  445|Homo sapiens mitochondrial ATP synth...   105   2e-22
BC016512-1|AAH16512.1|  529|Homo sapiens ATP synthase, H+ transp...   105   2e-22
M19483-1|AAA51808.1|  529|Homo sapiens ATPSB protein.                 100   5e-21
X05606-1|CAA29095.1|  312|Homo sapiens beta-subunit (AA 1-312) p...    50   1e-05

>X03559-1|CAA27246.1|  539|Homo sapiens protein ( Human mRNA for
           F1-ATPase beta subunit (F-1 beta). ).
          Length = 539

 Score =  105 bits (251), Expect = 2e-22
 Identities = 55/95 (57%), Positives = 62/95 (65%)
 Frame = +2

Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
           VRTIAMDGTE LVRGQ VL SG+PI  P    TL  I+NV G PID RGPI T + A IH
Sbjct: 118 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 177

Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
           AE+P  ++   + E  V  IKV D L PYA GG I
Sbjct: 178 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 212



 Score = 82.6 bits (195), Expect = 1e-15
 Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
 Frame = +1

Query: 49  PFQNVEKSLQSMPLTSRDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALE 213
           P Q + ++++      RDYAA++     AG   G++VAVIGA VDVQF++ LPPILNALE
Sbjct: 38  PAQLLLRAVRRRSHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALE 97

Query: 214 VQNRSPRLVLEVTQHLGXNT 273
           VQ R  RLVLEV QHLG +T
Sbjct: 98  VQGRETRLVLEVAQHLGEST 117



 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +1

Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
           GKT LIMELINNV +AHG YS  AG GER  + NDLY EMI
Sbjct: 221 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 261


>M27132-1|AAA51809.1|  529|Homo sapiens ATP synthase beta subunit
           precursor protein.
          Length = 529

 Score =  105 bits (251), Expect = 2e-22
 Identities = 55/95 (57%), Positives = 62/95 (65%)
 Frame = +2

Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
           VRTIAMDGTE LVRGQ VL SG+PI  P    TL  I+NV G PID RGPI T + A IH
Sbjct: 108 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 167

Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
           AE+P  ++   + E  V  IKV D L PYA GG I
Sbjct: 168 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 202



 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
 Frame = +1

Query: 97  RDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHL 261
           RDYAA++     AG   G++VAVIGA VDVQF++ LPPILNALEVQ R  RLVLEV QHL
Sbjct: 44  RDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHL 103

Query: 262 GXNT 273
           G +T
Sbjct: 104 GEST 107



 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +1

Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
           GKT LIMELINNV +AHG YS  AG GER  + NDLY EMI
Sbjct: 211 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 251


>D00022-1|BAA00016.1|  539|Homo sapiens F1 beta subunit protein.
          Length = 539

 Score =  105 bits (251), Expect = 2e-22
 Identities = 55/95 (57%), Positives = 62/95 (65%)
 Frame = +2

Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
           VRTIAMDGTE LVRGQ VL SG+PI  P    TL  I+NV G PID RGPI T + A IH
Sbjct: 118 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 177

Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
           AE+P  ++   + E  V  IKV D L PYA GG I
Sbjct: 178 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 212



 Score = 82.6 bits (195), Expect = 1e-15
 Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
 Frame = +1

Query: 49  PFQNVEKSLQSMPLTSRDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALE 213
           P Q + ++++      RDYAA++     AG   G++VAVIGA VDVQF++ LPPILNALE
Sbjct: 38  PAQLLLRAVRRRSHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALE 97

Query: 214 VQNRSPRLVLEVTQHLGXNT 273
           VQ R  RLVLEV QHLG +T
Sbjct: 98  VQGRETRLVLEVAQHLGEST 117



 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +1

Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
           GKT LIMELINNV +AHG YS  AG GER  + NDLY EMI
Sbjct: 221 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 261


>DQ403107-1|ABD77240.1|  445|Homo sapiens mitochondrial ATP
           synthase, H+ transporting F1 complex beta subunit
           protein.
          Length = 445

 Score =  105 bits (251), Expect = 2e-22
 Identities = 55/95 (57%), Positives = 62/95 (65%)
 Frame = +2

Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
           VRTIAMDGTE LVRGQ VL SG+PI  P    TL  I+NV G PID RGPI T + A IH
Sbjct: 44  VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 103

Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
           AE+P  ++   + E  V  IKV D L PYA GG I
Sbjct: 104 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 138



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +1

Query: 145 AVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHLGXNT 273
           AVIGA VDVQF++ LPPILNALEVQ R  RLVLEV QHLG +T
Sbjct: 1   AVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGEST 43



 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +1

Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
           GKT LIMELINNV +AHG YS  AG GER  + NDLY EMI
Sbjct: 147 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 187


>BC016512-1|AAH16512.1|  529|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, beta polypeptide
           protein.
          Length = 529

 Score =  105 bits (251), Expect = 2e-22
 Identities = 55/95 (57%), Positives = 62/95 (65%)
 Frame = +2

Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
           VRTIAMDGTE LVRGQ VL SG+PI  P    TL  I+NV G PID RGPI T + A IH
Sbjct: 108 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 167

Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
           AE+P  ++   + E  V  IKV D L PYA GG I
Sbjct: 168 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 202



 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
 Frame = +1

Query: 97  RDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHL 261
           RDYAA++     AG   G++VAVIGA VDVQF++ LPPILNALEVQ R  RLVLEV QHL
Sbjct: 44  RDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHL 103

Query: 262 GXNT 273
           G +T
Sbjct: 104 GEST 107



 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +1

Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
           GKT LIMELINNV +AHG YS  AG GER  + NDLY EMI
Sbjct: 211 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 251


>M19483-1|AAA51808.1|  529|Homo sapiens ATPSB protein.
          Length = 529

 Score =  100 bits (240), Expect = 5e-21
 Identities = 53/95 (55%), Positives = 60/95 (63%)
 Frame = +2

Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
           VRTIAMDGTE LVRGQ VL SG  +  P    TL  I+NV G PID RGPI T + A IH
Sbjct: 108 VRTIAMDGTEGLVRGQKVLDSGDQLKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 167

Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
           AE+P  ++   + E  V  IKV D L PYA GG I
Sbjct: 168 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 202



 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
 Frame = +1

Query: 97  RDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHL 261
           RDYAA++     AG   G++VAVIGA VDVQF++ LPPILNALEVQ R  RLVLEV QHL
Sbjct: 44  RDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHL 103

Query: 262 GXNT 273
           G +T
Sbjct: 104 GEST 107



 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +1

Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
           GKT LIMELINNV +AHG YS  AG GER  + NDLY EMI
Sbjct: 211 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 251


>X05606-1|CAA29095.1|  312|Homo sapiens beta-subunit (AA 1-312)
           protein.
          Length = 312

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = +1

Query: 607 ELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
           ELINNV +AHG YS  AG GER  + NDLY EMI
Sbjct: 1   ELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,778,694
Number of Sequences: 237096
Number of extensions: 1538073
Number of successful extensions: 2493
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2493
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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