Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120054.Seq
         (702 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF110224-1|AAL36912.1|  151|Homo sapiens MSTP014 protein.              31   3.0  
BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated prot...    31   5.3  
BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated prot...    31   5.3  
BC119643-1|AAI19644.1|  370|Homo sapiens keratin associated prot...    31   5.3  
AK129960-1|BAC85259.1|  488|Homo sapiens protein ( Homo sapiens ...    31   5.3  
AB076354-1|BAD01541.1|  370|Homo sapiens keratin associated prot...    31   5.3  
AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated prot...    31   5.3  
AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein pr...    30   7.0  
AB076353-1|BAD01540.1|  365|Homo sapiens keratin associated prot...    30   9.2  

>AF110224-1|AAL36912.1|  151|Homo sapiens MSTP014 protein.
          Length = 151

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 148 NSCFLKSSSVFCATSPCSAFVCSVNVAISLVTNCLFFSSC 29
           NSC L SS +    SP    +C  N+ ++ VTN L    C
Sbjct: 101 NSCVLVSSLICYPESPVLVLLCDGNMLVNCVTNLLCVCVC 140


>BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 148 NSCFLKSSSVFCATSPCSAFVCSVNVAIS-LVTNCLFFSSCC 26
           +SC  +SS V C +SPC   VC  +   S  +++C    SCC
Sbjct: 170 SSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCT--PSCC 209


>BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 148 NSCFLKSSSVFCATSPCSAFVCSVNVAIS-LVTNCLFFSSCC 26
           +SC  +SS V C +SPC   VC  +   S  +++C    SCC
Sbjct: 170 SSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCT--PSCC 209


>BC119643-1|AAI19644.1|  370|Homo sapiens keratin associated protein
           10-7 protein.
          Length = 370

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 148 NSCFLKSSSVFCATSPCSAFVCSVNVAIS-LVTNCLFFSSCC 26
           +SC  +SS V C +SPC   VC  +   S  +++C    SCC
Sbjct: 170 SSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCT--PSCC 209


>AK129960-1|BAC85259.1|  488|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26450 fis, clone KDN03005. ).
          Length = 488

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 24/82 (29%), Positives = 39/82 (47%)
 Frame = +3

Query: 21  IKQQEEKNKQLVTKLIATFTEHTNALQGLVAQKTEELFKKQEFIERIIAIKDKQIEAKDL 200
           IK   ++ ++L  +L AT  E+ + LQG V    EEL  +   +ER    KD Q+    L
Sbjct: 236 IKMLSDRKRELEHRLSATLEEN-DLLQGTV----EELQDRVLILERQGHDKDLQLHQSQL 290

Query: 201 QVTRVMTDLNRMYTGFQELCRE 266
           ++  V     ++    +EL  E
Sbjct: 291 ELQEVRLSCRQLQVKVEELTEE 312


>AB076354-1|BAD01541.1|  370|Homo sapiens keratin associated protein
           protein.
          Length = 370

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 148 NSCFLKSSSVFCATSPCSAFVCSVNVAIS-LVTNCLFFSSCC 26
           +SC  +SS V C +SPC   VC  +   S  +++C    SCC
Sbjct: 170 SSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCT--PSCC 209


>AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated protein
           protein.
          Length = 401

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 148 NSCFLKSSSVFCATSPCSAFVCSVNVAIS-LVTNCLFFSSCC 26
           +SC  +SS V C +SPC   VC  +   S  +++C    SCC
Sbjct: 170 SSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCISSCT--PSCC 209


>AL834139-1|CAD38854.1| 1340|Homo sapiens hypothetical protein
            protein.
          Length = 1340

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 490  RCQHCGENIRPNPTVDWNNATDRLQSKRSKRTFSFDSL 603
            RCQ  GE   P PT++W  A   L++ R  RT    SL
Sbjct: 1226 RCQATGE---PTPTIEWLQAGQPLRASRRLRTLPDGSL 1260


>AB076353-1|BAD01540.1|  365|Homo sapiens keratin associated protein
           protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 148 NSCFLKSSSVFCATSPCSAFVCSVNVAISLVTNCLFFSSCC 26
           +SC  +SS V C +SPC   VC  +   S  T+     SCC
Sbjct: 170 SSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSC-TPSCC 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,368,726
Number of Sequences: 237096
Number of extensions: 1729631
Number of successful extensions: 4930
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4924
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)