Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0033
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC079799-1|AAS07488.1| 591|Homo sapiens unknown protein. 34 0.53
AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein. 34 0.53
BC030690-1|AAH30690.1| 751|Homo sapiens sema domain, immunoglob... 31 3.8
AB000220-1|BAA32398.1| 751|Homo sapiens semaphorin E protein. 31 3.8
BC099724-1|AAH99724.1| 782|Homo sapiens sema domain, immunoglob... 30 8.7
BC098137-1|AAH98137.1| 782|Homo sapiens sema domain, immunoglob... 30 8.7
BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein. 30 8.7
AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein. 30 8.7
AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein. 30 8.7
>AC079799-1|AAS07488.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 33.9 bits (74), Expect = 0.53
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*NILFA--RYRRCRVNGEVCRVYTLARRPY 276
K PVP+ M+I S++ ++++ A R+ C + G C LAR PY
Sbjct: 302 KDPVPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPY 352
>AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein.
Length = 814
Score = 33.9 bits (74), Expect = 0.53
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*NILFA--RYRRCRVNGEVCRVYTLARRPY 276
K PVP+ M+I S++ ++++ A R+ C + G C LAR PY
Sbjct: 525 KDPVPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPY 575
>BC030690-1|AAH30690.1| 751|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 751
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*N--ILFARYRRCRVNGEVCRVYTLARRPY 276
K P+ M I S+K +++V+ N + RC + G C LAR PY
Sbjct: 481 KNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRCHIYGTACADCCLARDPY 531
>AB000220-1|BAA32398.1| 751|Homo sapiens semaphorin E protein.
Length = 751
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*N--ILFARYRRCRVNGEVCRVYTLARRPY 276
K P+ M I S+K +++V+ N + RC + G C LAR PY
Sbjct: 481 KNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRCHIYGTACADCCLARDPY 531
>BC099724-1|AAH99724.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*NILFARYR--RCRVNGEVCRVYTLARRPY 276
K P P+ M+I ++ ++V + A+ R +C G C LAR PY
Sbjct: 489 KVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPY 539
>BC098137-1|AAH98137.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*NILFARYR--RCRVNGEVCRVYTLARRPY 276
K P P+ M+I ++ ++V + A+ R +C G C LAR PY
Sbjct: 489 KVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPY 539
>BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*NILFARYR--RCRVNGEVCRVYTLARRPY 276
K P P+ M+I ++ ++V + A+ R +C G C LAR PY
Sbjct: 489 KVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPY 539
>AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein.
Length = 725
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*NILFARYR--RCRVNGEVCRVYTLARRPY 276
K P P+ M+I ++ ++V + A+ R +C G C LAR PY
Sbjct: 432 KVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPY 482
>AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 422 KQPVPL*RMDIKSRKTKVFVN*NILFARYR--RCRVNGEVCRVYTLARRPY 276
K P P+ M+I ++ ++V + A+ R +C G C LAR PY
Sbjct: 489 KVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPY 539
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,303,595
Number of Sequences: 237096
Number of extensions: 1788739
Number of successful extensions: 2496
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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