SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B02
         (543 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110541-1|AAI10542.1|  409|Homo sapiens SLC4A11 protein protein.      32   1.5  
BC110540-1|AAI10541.1|  891|Homo sapiens solute carrier family 4...    32   1.5  
AL109976-2|CAB90170.4|  918|Homo sapiens solute carrier family 4...    32   1.5  
AL109976-1|CAD55941.1|  891|Homo sapiens solute carrier family 4...    32   1.5  
AK075303-1|BAC11536.1|  633|Homo sapiens protein ( Homo sapiens ...    32   1.5  
AF336127-1|AAK16734.1|  891|Homo sapiens bicarbonate transporter...    32   1.5  

>BC110541-1|AAI10542.1|  409|Homo sapiens SLC4A11 protein protein.
          Length = 409

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 391 LLLICHYIFLFHVLYSLKM*IYIHKFVSESVSNC*LPTSLYVSIMQTGSGKNTLVMSFHI 212
           LL++   ++L + LY  K   Y+H  V E +S+C LP ++    + +  G   + MS   
Sbjct: 96  LLIMLGTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFR 155

Query: 211 YAGNPN 194
           Y  NP+
Sbjct: 156 Y--NPS 159


>BC110540-1|AAI10541.1|  891|Homo sapiens solute carrier family 4,
           sodium borate transporter, member 11 protein.
          Length = 891

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 391 LLLICHYIFLFHVLYSLKM*IYIHKFVSESVSNC*LPTSLYVSIMQTGSGKNTLVMSFHI 212
           LL++   ++L + LY  K   Y+H  V E +S+C LP ++    + +  G   + MS   
Sbjct: 578 LLIMLGTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFR 637

Query: 211 YAGNPN 194
           Y  NP+
Sbjct: 638 Y--NPS 641


>AL109976-2|CAB90170.4|  918|Homo sapiens solute carrier family 4,
           sodium bicarbonate transporter-like, member 11 protein.
          Length = 918

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 391 LLLICHYIFLFHVLYSLKM*IYIHKFVSESVSNC*LPTSLYVSIMQTGSGKNTLVMSFHI 212
           LL++   ++L + LY  K   Y+H  V E +S+C LP ++    + +  G   + MS   
Sbjct: 605 LLIMLGTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFR 664

Query: 211 YAGNPN 194
           Y  NP+
Sbjct: 665 Y--NPS 668


>AL109976-1|CAD55941.1|  891|Homo sapiens solute carrier family 4,
           sodium bicarbonate transporter-like, member 11 protein.
          Length = 891

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 391 LLLICHYIFLFHVLYSLKM*IYIHKFVSESVSNC*LPTSLYVSIMQTGSGKNTLVMSFHI 212
           LL++   ++L + LY  K   Y+H  V E +S+C LP ++    + +  G   + MS   
Sbjct: 578 LLIMLGTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFR 637

Query: 211 YAGNPN 194
           Y  NP+
Sbjct: 638 Y--NPS 641


>AK075303-1|BAC11536.1|  633|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90822 fis, clone Y79AA1001426, weakly similar to
           ANION EXCHANGE PROTEIN 3. ).
          Length = 633

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 391 LLLICHYIFLFHVLYSLKM*IYIHKFVSESVSNC*LPTSLYVSIMQTGSGKNTLVMSFHI 212
           LL++   ++L + LY  K   Y+H  V E +S+C LP ++    + +  G   + MS   
Sbjct: 320 LLIMLGTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFR 379

Query: 211 YAGNPN 194
           Y  NP+
Sbjct: 380 Y--NPS 383


>AF336127-1|AAK16734.1|  891|Homo sapiens bicarbonate
           transporter-related protein BTR1 protein.
          Length = 891

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 391 LLLICHYIFLFHVLYSLKM*IYIHKFVSESVSNC*LPTSLYVSIMQTGSGKNTLVMSFHI 212
           LL++   ++L + LY  K   Y+H  V E +S+C LP ++    + +  G   + MS   
Sbjct: 578 LLIMLGTLWLGYTLYQFKKSPYLHPCVREILSDCALPIAVLAFSLISSHGFREIEMSKFR 637

Query: 211 YAGNPN 194
           Y  NP+
Sbjct: 638 Y--NPS 641


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,380,067
Number of Sequences: 237096
Number of extensions: 1283460
Number of successful extensions: 1474
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -