Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A04
         (311 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U44772-1|AAB06236.1|  306|Homo sapiens palmitoyl protein thioest...    68   5e-12
L42809-1|AAA85337.1|  306|Homo sapiens palmitoyl-protein thioest...    68   5e-12
CR542053-1|CAG46850.1|  306|Homo sapiens PPT1 protein.                 68   5e-12
BC008426-1|AAH08426.1|  306|Homo sapiens palmitoyl-protein thioe...    68   5e-12
AL512599-15|CAI11025.1|  306|Homo sapiens palmitoyl-protein thio...    68   5e-12
AL512599-13|CAI11023.1|  105|Homo sapiens palmitoyl-protein thio...    68   5e-12
AF022211-1|AAB72224.1|  306|Homo sapiens palmitoyl-protein thioe...    68   5e-12
AL512599-14|CAI11024.1|  177|Homo sapiens palmitoyl-protein thio...    54   7e-08
BC029611-1|AAH29611.1|  400|Homo sapiens amyotrophic lateral scl...    29   3.8  
AK090601-1|BAC03487.1|  400|Homo sapiens protein ( Homo sapiens ...    29   3.8  
AC007279-3|AAY15056.1|  337|Homo sapiens unknown protein.              29   3.8  
AB053301-1|BAB69011.1|  432|Homo sapiens ALS2CR4 protein.              29   3.8  

>U44772-1|AAB06236.1|  306|Homo sapiens palmitoyl protein
           thioesterase protein.
          Length = 306

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = +3

Query: 15  RRILTLQESAIYTQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           +  + LQE+++YTQDRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 253 KETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 305


>L42809-1|AAA85337.1|  306|Homo sapiens palmitoyl-protein
           thioesterase protein.
          Length = 306

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = +3

Query: 15  RRILTLQESAIYTQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           +  + LQE+++YTQDRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 253 KETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 305


>CR542053-1|CAG46850.1|  306|Homo sapiens PPT1 protein.
          Length = 306

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = +3

Query: 15  RRILTLQESAIYTQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           +  + LQE+++YTQDRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 253 KETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 305


>BC008426-1|AAH08426.1|  306|Homo sapiens palmitoyl-protein
           thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
           infantile) protein.
          Length = 306

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = +3

Query: 15  RRILTLQESAIYTQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           +  + LQE+++YTQDRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 253 KETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 305


>AL512599-15|CAI11025.1|  306|Homo sapiens palmitoyl-protein
           thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
           infantile) protein.
          Length = 306

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = +3

Query: 15  RRILTLQESAIYTQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           +  + LQE+++YTQDRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 253 KETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 305


>AL512599-13|CAI11023.1|  105|Homo sapiens palmitoyl-protein
           thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
           infantile) protein.
          Length = 105

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = +3

Query: 15  RRILTLQESAIYTQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           +  + LQE+++YTQDRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 52  KETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 104


>AF022211-1|AAB72224.1|  306|Homo sapiens palmitoyl-protein
           thioesterase protein.
          Length = 306

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = +3

Query: 15  RRILTLQESAIYTQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           +  + LQE+++YTQDRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 253 KETIPLQETSLYTQDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 305


>AL512599-14|CAI11024.1|  177|Homo sapiens palmitoyl-protein
           thioesterase 1 (ceroid-lipofuscinosis, neuronal 1,
           infantile) protein.
          Length = 177

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = +3

Query: 51  TQDRLGLKRMDKEGKLVFLSTPGDHLRFTDQWMISEIINPYL 176
           ++DRLGLK MD  G+LVFL+T GDHL+ +++W  + II P+L
Sbjct: 136 SEDRLGLKEMDNAGQLVFLATEGDHLQLSEEWFYAHII-PFL 176


>BC029611-1|AAH29611.1|  400|Homo sapiens amyotrophic lateral
           sclerosis 2 (juvenile) chromosome region, candidate 4
           protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 291 RKKKTRLSFTLNTPIIKKLNNGISLIINEN 202
           R+KKTRL   L T   +K ++  SL+ NEN
Sbjct: 75  RQKKTRLPLELETSSTQKKSSSSSLLRNEN 104


>AK090601-1|BAC03487.1|  400|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33282 fis, clone ASTRO2009118. ).
          Length = 400

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 291 RKKKTRLSFTLNTPIIKKLNNGISLIINEN 202
           R+KKTRL   L T   +K ++  SL+ NEN
Sbjct: 75  RQKKTRLPLELETSSTQKKSSSSSLLRNEN 104


>AC007279-3|AAY15056.1|  337|Homo sapiens unknown protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 291 RKKKTRLSFTLNTPIIKKLNNGISLIINEN 202
           R+KKTRL   L T   +K ++  SL+ NEN
Sbjct: 75  RQKKTRLPLELETSSTQKKSSSSSLLRNEN 104


>AB053301-1|BAB69011.1|  432|Homo sapiens ALS2CR4 protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 291 RKKKTRLSFTLNTPIIKKLNNGISLIINEN 202
           R+KKTRL   L T   +K ++  SL+ NEN
Sbjct: 107 RQKKTRLPLELETSSTQKKSSSSSLLRNEN 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,709,054
Number of Sequences: 237096
Number of extensions: 688276
Number of successful extensions: 1112
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)