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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A03
         (433 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035609-1|AAH35609.1| 1195|Homo sapiens myotubularin related pr...    29   6.8  
AF264717-1|AAF72539.1| 1195|Homo sapiens FYVE domain-containing ...    29   6.8  
AB014547-1|BAA31622.2| 1195|Homo sapiens KIAA0647 protein protein.     29   6.8  
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou...    29   9.0  
AY186778-1|AAO27434.1|  727|Homo sapiens polymerase protein.           29   9.0  
AF298588-1|AAK11554.1|  956|Homo sapiens polymerase protein.           29   9.0  
AF298587-1|AAK11553.1|  956|Homo sapiens polymerase protein.           29   9.0  
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro...    29   9.0  
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro...    29   9.0  
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein...    29   9.0  
AF074086-7|AAD21097.1|  956|Homo sapiens polymerase protein.           29   9.0  
AF074086-3|AAF88167.1|  956|Homo sapiens polymerase protein.           29   9.0  

>BC035609-1|AAH35609.1| 1195|Homo sapiens myotubularin related
           protein 4 protein.
          Length = 1195

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 198 AEDKKLLG-DSQCGYENNIPMVCCPISNACKTPDD 299
           A+   +LG  S+C  ++++  VC P S AC+TP D
Sbjct: 793 AQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLD 827


>AF264717-1|AAF72539.1| 1195|Homo sapiens FYVE domain-containing
           dual specificity protein phosphatase FYVE-DSP2 protein.
          Length = 1195

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 198 AEDKKLLG-DSQCGYENNIPMVCCPISNACKTPDD 299
           A+   +LG  S+C  ++++  VC P S AC+TP D
Sbjct: 793 AQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLD 827


>AB014547-1|BAA31622.2| 1195|Homo sapiens KIAA0647 protein protein.
          Length = 1195

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 198 AEDKKLLG-DSQCGYENNIPMVCCPISNACKTPDD 299
           A+   +LG  S+C  ++++  VC P S AC+TP D
Sbjct: 793 AQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLD 827


>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
           retrovirus HERV-K10. ).
          Length = 1361

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
           ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 667 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 714


>AY186778-1|AAO27434.1|  727|Homo sapiens polymerase protein.
          Length = 727

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
           ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 628 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 675


>AF298588-1|AAK11554.1|  956|Homo sapiens polymerase protein.
          Length = 956

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
           ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812


>AF298587-1|AAK11553.1|  956|Homo sapiens polymerase protein.
          Length = 956

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
           ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812


>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
          Length = 1879

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99   AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
            ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 1688 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 1735


>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
          Length = 1755

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99   AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
            ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 1690 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 1737


>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
            protein.
          Length = 2294

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99   AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
            ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 1688 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 1735


>AF074086-7|AAD21097.1|  956|Homo sapiens polymerase protein.
          Length = 956

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
           ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812


>AF074086-3|AAF88167.1|  956|Homo sapiens polymerase protein.
          Length = 956

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 99  AQTCTTPRNESGNCVSLYDCEPLLNLFRNKSRTAEDKKLLGDSQCGYENNI 251
           ++ CTTP+ +    ++LY     LN++RN++ T+ ++ L G     +E  +
Sbjct: 765 SKECTTPQMQLN--LALYTLN-FLNIYRNQTTTSAEQHLTGKKNSPHEGKL 812


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,076,882
Number of Sequences: 237096
Number of extensions: 1091240
Number of successful extensions: 1535
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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