SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A02
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02687-1|AAA18947.1|  993|Homo sapiens serine/threonine protein ...    30   5.2  
BC126350-1|AAI26351.1|  993|Homo sapiens fms-related tyrosine ki...    30   5.2  
BC036028-1|AAH36028.1|  596|Homo sapiens FLT3 protein protein.         30   5.2  
AL591024-3|CAH70634.1|  996|Homo sapiens fms-related tyrosine ki...    30   5.2  
AL445262-1|CAI17231.1|  996|Homo sapiens fms-related tyrosine ki...    30   5.2  
AL356915-1|CAI12447.1|  996|Homo sapiens fms-related tyrosine ki...    30   5.2  

>U02687-1|AAA18947.1|  993|Homo sapiens serine/threonine protein
           kinase protein.
          Length = 993

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 38  KSDYSIKAASVAQLYYGATVVLRSRVRSPGRVKCYWVF 151
           +S  ++  A+  ++   A++ L+  V +PG + C WVF
Sbjct: 70  QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVF 107


>BC126350-1|AAI26351.1|  993|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 993

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 38  KSDYSIKAASVAQLYYGATVVLRSRVRSPGRVKCYWVF 151
           +S  ++  A+  ++   A++ L+  V +PG + C WVF
Sbjct: 70  QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVF 107


>BC036028-1|AAH36028.1|  596|Homo sapiens FLT3 protein protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 38  KSDYSIKAASVAQLYYGATVVLRSRVRSPGRVKCYWVF 151
           +S  ++  A+  ++   A++ L+  V +PG + C WVF
Sbjct: 70  QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVF 107


>AL591024-3|CAH70634.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 38  KSDYSIKAASVAQLYYGATVVLRSRVRSPGRVKCYWVF 151
           +S  ++  A+  ++   A++ L+  V +PG + C WVF
Sbjct: 70  QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVF 107


>AL445262-1|CAI17231.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 38  KSDYSIKAASVAQLYYGATVVLRSRVRSPGRVKCYWVF 151
           +S  ++  A+  ++   A++ L+  V +PG + C WVF
Sbjct: 70  QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVF 107


>AL356915-1|CAI12447.1|  996|Homo sapiens fms-related tyrosine
           kinase 3 protein.
          Length = 996

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 38  KSDYSIKAASVAQLYYGATVVLRSRVRSPGRVKCYWVF 151
           +S  ++  A+  ++   A++ L+  V +PG + C WVF
Sbjct: 70  QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVF 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,945,911
Number of Sequences: 237096
Number of extensions: 1334641
Number of successful extensions: 2712
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2712
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -