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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A09
         (577 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit ...    40   0.008
AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein.    40   0.008
AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein.    40   0.008
AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein.    40   0.008
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot...    36   0.14 
AF007194-1|AAC02272.1|  957|Homo sapiens mucin protein.                36   0.14 
AB037729-1|BAA92546.1|  745|Homo sapiens KIAA1308 protein protein.     35   0.18 
BC001940-1|AAH01940.2|  748|Homo sapiens hypothetical protein DK...    31   2.9  
AK074809-1|BAC11221.1|  748|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AB162218-1|BAD36741.1|  748|Homo sapiens hFLEG1 protein.               31   2.9  
AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.              30   6.7  

>L36531-1|AAA93514.1| 1025|Homo sapiens integrin alpha 8 subunit
           protein.
          Length = 1025

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
 Frame = +3

Query: 120 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           + +P++LT +        A+     LN DG +   + VPFAG D+      G + + N  
Sbjct: 333 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 387

Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDYHDITAKAFATRNIA 467
           K G  T    +      GV  +     GFG   T  G  ++  NDY D+   AF T  +A
Sbjct: 388 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGTGKVA 441

Query: 468 RYR 476
            YR
Sbjct: 442 VYR 444


>AY371697-1|AAQ56848.2| 1063|Homo sapiens integrin, alpha 8 protein.
          Length = 1063

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
 Frame = +3

Query: 120 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           + +P++LT +        A+     LN DG +   + VPFAG D+      G + + N  
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425

Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDYHDITAKAFATRNIA 467
           K G  T    +      GV  +     GFG   T  G  ++  NDY D+   AF T  +A
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGTGKVA 479

Query: 468 RYR 476
            YR
Sbjct: 480 VYR 482


>AL590636-1|CAI14955.1| 1063|Homo sapiens integrin, alpha 8 protein.
          Length = 1063

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
 Frame = +3

Query: 120 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           + +P++LT +        A+     LN DG +   + VPFAG D+      G + + N  
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425

Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDYHDITAKAFATRNIA 467
           K G  T    +      GV  +     GFG   T  G  ++  NDY D+   AF T  +A
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGTGKVA 479

Query: 468 RYR 476
            YR
Sbjct: 480 VYR 482


>AL359645-1|CAH73424.1| 1063|Homo sapiens integrin, alpha 8 protein.
          Length = 1063

 Score = 39.5 bits (88), Expect = 0.008
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
 Frame = +3

Query: 120 YEEPELLTSSRVRRDAHGALT----LNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           + +P++LT +        A+     LN DG +   + VPFAG D+      G + + N  
Sbjct: 371 FRDPQILTGTETFGRFGSAMAHLGDLNQDGYNDIAIGVPFAGKDQR-----GKVLIYNGN 425

Query: 288 KLGAATAGVALDNVNGHGVSLTDTHIPGFGDKVTAAGKVNLFHNDYHDITAKAFATRNIA 467
           K G  T    +      GV  +     GFG   T  G  ++  NDY D+   AF T  +A
Sbjct: 426 KDGLNTKPSQV----LQGVWASHAVPSGFG--FTLRGDSDIDKNDYPDLIVGAFGTGKVA 479

Query: 468 RYR 476
            YR
Sbjct: 480 VYR 482


>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
           protein.
          Length = 1217

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 24/79 (30%), Positives = 37/79 (46%)
 Frame = -1

Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 206
           T    PG   S+  T    T S +TP++++ +    V +      + F +  ++  +TP 
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367

Query: 205 PEVPSELSVRAPCASLRTL 149
           P  PS LS   P  SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386


>AF007194-1|AAC02272.1|  957|Homo sapiens mucin protein.
          Length = 957

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 24/79 (30%), Positives = 37/79 (46%)
 Frame = -1

Query: 385 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 206
           T    PG   S+  T    T S +TP++++ +    V +      + F +  ++  +TP 
Sbjct: 313 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 367

Query: 205 PEVPSELSVRAPCASLRTL 149
           P  PS LS   P  SLRTL
Sbjct: 368 PVTPSSLSTDIPTTSLRTL 386


>AB037729-1|BAA92546.1|  745|Homo sapiens KIAA1308 protein protein.
          Length = 745

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = -3

Query: 539 PIVSWDI*SIPQPTVLKLGTLAISGNISGGESLRCDVVVIVVEEIHFAGSCHLVSEPGDV 360
           P   WD+  +P P+VL +    I G++    SL+  +V++    +H A  CH  + P  +
Sbjct: 578 PTGQWDLLILPSPSVLGISLTVIPGDLRHQLSLQQHLVLL---SLHHARGCH--THPQAL 632

Query: 359 CIR 351
           C+R
Sbjct: 633 CLR 635


>BC001940-1|AAH01940.2|  748|Homo sapiens hypothetical protein
           DKFZp762E1312 protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 352 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 260
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AK074809-1|BAC11221.1|  748|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90328 fis, clone NT2RP2001921. ).
          Length = 748

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 352 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 260
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AB162218-1|BAD36741.1|  748|Homo sapiens hFLEG1 protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 352 VRLTPWPFTLSSATPAVAAPSFCLLVKSKEP 260
           VR+TP P   S A+PAV AP +C  +  K P
Sbjct: 175 VRVTPLP---SLASPAVPAPGYCSRISGKSP 202


>AF179681-1|AAF72107.1| 1156|Homo sapiens unknown protein.
          Length = 1156

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = -1

Query: 334 PFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKG-TLTPAPEVPSELSVRAPCASL 158
           P T    TP  + PSF   V  + PI++ +    P    TL P P   + +    P  S 
Sbjct: 492 PLTSDPPTPPSSTPSFKPPVTRESPISMCVDSPPPLSFLTLLPVPSTGTSVITSKPMNST 551

Query: 157 RTLELVNSSGSS 122
             +  V ++ S+
Sbjct: 552 SVISTVTTNASA 563


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,536,165
Number of Sequences: 237096
Number of extensions: 1938809
Number of successful extensions: 4867
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4866
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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