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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10407
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   144   1e-34
AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   144   1e-34
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   144   1e-34
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   134   1e-31
AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD, i...   120   2e-27
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...   120   2e-27

>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  144 bits (348), Expect = 1e-34
 Identities = 70/84 (83%), Positives = 74/84 (88%)
 Frame = +3

Query: 6   RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
           RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLC
Sbjct: 42  RQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLC 101

Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
           NFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 NFHGMDLTTDKYRSMVKKWQTLIE 125



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 42/89 (47%), Positives = 59/89 (66%)
 Frame = +2

Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
           +A ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 125 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 184

Query: 434 REVVNKLIPDSIAKDIEKACHGIYPCAMF 520
           ++++       + K  +KA        MF
Sbjct: 185 KQLLTSWPWTRLRKISKKAVSAYIHYMMF 213


>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  144 bits (348), Expect = 1e-34
 Identities = 70/84 (83%), Positives = 74/84 (88%)
 Frame = +3

Query: 6   RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
           RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLC
Sbjct: 42  RQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLC 101

Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
           NFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 NFHGMDLTTDKYRSMVKKWQTLIE 125



 Score =  120 bits (289), Expect = 2e-27
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +2

Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
           +A ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 125 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 184

Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
           +++VNKL  DSIAKDIEK+C  IYP
Sbjct: 185 KQLVNKLALDSIAKDIEKSCQRIYP 209



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
 Frame = +1

Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
           PL DV IRKVKVLK+PRF++SKL+ELH             SE     RPEGYEPPVQE+V
Sbjct: 209 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  144 bits (348), Expect = 1e-34
 Identities = 70/84 (83%), Positives = 74/84 (88%)
 Frame = +3

Query: 6   RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLC 185
           RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLC
Sbjct: 42  RQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLC 101

Query: 186 NFHGMDLTTDKLRWMVKKWQTLIK 257
           NFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 NFHGMDLTTDKYRSMVKKWQTLIE 125



 Score =  120 bits (289), Expect = 2e-27
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +2

Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
           +A ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 125 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 184

Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
           +++VNKL  DSIAKDIEK+C  IYP
Sbjct: 185 KQLVNKLALDSIAKDIEKSCQRIYP 209



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
 Frame = +1

Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
           PL DV IRKVKVLK+PRF++SKL+ELH             SE     RPEGYEPPVQE+V
Sbjct: 209 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  134 bits (324), Expect = 1e-31
 Identities = 67/85 (78%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = +3

Query: 6   RQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVL 182
           RQ+G TLVNRTQG +IAS+  KGRVFEVSL  DLQ D D E SFRKFRLIAE VQ RNVL
Sbjct: 42  RQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVL 101

Query: 183 CNFHGMDLTTDKLRWMVKKWQTLIK 257
           CNFHGMDLTTDK R MVKKWQTLI+
Sbjct: 102 CNFHGMDLTTDKYRSMVKKWQTLIE 126



 Score =  114 bits (274), Expect = 1e-25
 Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTNSE 430
           +A ++ KT DGY+LRVFCIGFT KD  SQRKTCYA  +QVR IR  +M +IIT +V+ ++
Sbjct: 126 EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGAD 185

Query: 431 LREVVNKLIPDSIAKDIEKACHGIYP 508
           L+++VNKL  DSIAKDIEK+C  IYP
Sbjct: 186 LKQLVNKLALDSIAKDIEKSCQRIYP 211



 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
 Frame = +1

Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-RPEG----YEPPVQESV 669
           PL DV IRKVKVLK+PRF++SKL+ELH             SE  P+      +PPVQESV
Sbjct: 211 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAPKSTALKVKPPVQESV 270


>AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD,
           isoform D protein.
          Length = 163

 Score =  120 bits (289), Expect = 2e-27
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +2

Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
           +A ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 20  EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 79

Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
           +++VNKL  DSIAKDIEK+C  IYP
Sbjct: 80  KQLVNKLALDSIAKDIEKSCQRIYP 104



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
 Frame = +1

Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
           PL DV IRKVKVLK+PRF++SKL+ELH             SE     RPEGYEPPVQE+V
Sbjct: 104 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 163



 Score = 38.7 bits (86), Expect = 0.008
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +3

Query: 198 MDLTTDKLRWMVKKWQTLIK 257
           MDLTTDK R MVKKWQTLI+
Sbjct: 1   MDLTTDKYRSMVKKWQTLIE 20


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score =  120 bits (289), Expect = 2e-27
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +2

Query: 254 QANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 433
           +A ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR IR +M +IIT +V+ ++L
Sbjct: 75  EAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADL 134

Query: 434 REVVNKLIPDSIAKDIEKACHGIYP 508
           +++VNKL  DSIAKDIEK+C  IYP
Sbjct: 135 KQLVNKLALDSIAKDIEKSCQRIYP 159



 Score =  112 bits (269), Expect = 5e-25
 Identities = 54/62 (87%), Positives = 55/62 (88%)
 Frame = +3

Query: 72  GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 251
           GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14  GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73

Query: 252 IK 257
           I+
Sbjct: 74  IE 75



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
 Frame = +1

Query: 505 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 669
           PL DV IRKVKVLK+PRF++SKL+ELH             SE     RPEGYEPPVQE+V
Sbjct: 159 PLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,129,445
Number of Sequences: 53049
Number of extensions: 670058
Number of successful extensions: 2039
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2033
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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