Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10391
(602 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 165 5e-41
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 165 5e-41
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 165 5e-41
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 165 5e-41
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 165 5e-41
AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA... 32 0.69
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 1.6
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 1.6
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 165 bits (400), Expect = 5e-41
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
NGHIGLGVKCSKEVATAIRGAIILAKLSV
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSV 145
Score = 74.9 bits (176), Expect = 7e-14
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VR
Sbjct: 146 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVR 177
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKI 247
KED KEWVPVTKLGRLVREGKI
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKI 58
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 165 bits (400), Expect = 5e-41
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
NGHIGLGVKCSKEVATAIRGAIILAKLSV
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSV 145
Score = 74.9 bits (176), Expect = 7e-14
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VR
Sbjct: 146 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVR 177
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKI 247
KED KEWVPVTKLGRLVREGKI
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKI 58
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 165 bits (400), Expect = 5e-41
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
NGHIGLGVKCSKEVATAIRGAIILAKLSV
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSV 145
Score = 74.9 bits (176), Expect = 7e-14
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VR
Sbjct: 146 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVR 177
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKI 247
KED KEWVPVTKLGRLVREGKI
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKI 58
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 165 bits (400), Expect = 5e-41
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
NGHIGLGVKCSKEVATAIRGAIILAKLSV
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSV 145
Score = 74.9 bits (176), Expect = 7e-14
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VR
Sbjct: 146 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVR 177
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKI 247
KED KEWVPVTKLGRLVREGKI
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKI 58
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 165 bits (400), Expect = 5e-41
Identities = 81/89 (91%), Positives = 83/89 (93%)
Frame = +1
Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
K + E IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
NGHIGLGVKCSKEVATAIRGAIILAKLSV
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSV 145
Score = 74.9 bits (176), Expect = 7e-14
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VR
Sbjct: 146 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVR 177
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2
Query: 182 KEDQKEWVPVTKLGRLVREGKI 247
KED KEWVPVTKLGRLVREGKI
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKI 58
>AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA
protein.
Length = 1052
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 175 ARQGRPERVGSCHQTRPSCSRRKNRQTESIYLFSLPIKEFEIIDF 309
AR RP+R G + +R +N +E YL +P++ FE DF
Sbjct: 180 ARSSRPQRQGRGLRRLFESNRSQNPPSEHHYLHGVPVRRFERQDF 224
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 188 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 45
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 188 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 45
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,556,812
Number of Sequences: 53049
Number of extensions: 548998
Number of successful extensions: 2804
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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