Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30001
(833 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 46 6e-05
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 41 0.002
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 39 0.010
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 39 0.010
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 31 1.5
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 31 1.9
DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom bod... 29 7.8
AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein ... 29 7.8
AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein ... 29 7.8
AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-P... 29 7.8
AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-P... 29 7.8
AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-P... 29 7.8
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 29 7.8
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 29 7.8
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 46.0 bits (104), Expect = 6e-05
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Frame = -3
Query: 465 YADDIVLM------TPTLDQMQAKLEDLRISAEKRGLRINTNKTVD----MRVMSKNTTP 316
YADDI L+ +Q L L ++ L++N KT++ ++ +S T P
Sbjct: 678 YADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSPVTAP 737
Query: 315 LKLQDCGFEVSTEVYISGELLSNQGGSDEDIEIRIRKARGAFAQLKPVWE-SSVMTRRIK 139
++L+ + ++ G L + ++ R+ QL+ + S MT R K
Sbjct: 738 IELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAK 797
Query: 138 LTLFDSIVKSVLLFGCETWRV-TKTLTNRLQVFVNKCLRSI 19
++ V + L+G + W + K+ NR+QV N+ +R+I
Sbjct: 798 RAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAI 838
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = -1
Query: 707 LKQRGIPNKIIGIIQALYRGSTCRVVHDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDIM 528
L+ G P + +Q Y G + D GVKQG LSP+LF +++D ++
Sbjct: 499 LRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLL 558
Query: 527 REVVTTLGALNGAKIS 480
R + + +GA G I+
Sbjct: 559 RTLPSEIGAKVGNAIT 574
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 38.7 bits (86), Expect = 0.010
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Frame = -3
Query: 423 MQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTP-------LKLQDCGFEVSTEVYIS 265
MQ+ L +L I +K ++IN NKT + +K P L++ D + +
Sbjct: 715 MQSYLNELDIYYKKWKIKINPNKT-NAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYL 773
Query: 264 GELLSNQGGSDEDIEIRIRKARGAFAQLKP-VWESSVMTRRIKLTLFDSIVKSVLLFGCE 88
G + + I I K L P + S ++ K+ +F +I +L++G
Sbjct: 774 GIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSP 833
Query: 87 TW-RVTKTLTNRLQVFVNKCLRSILRI 10
W R +T +LQ+ NK L+ I+ +
Sbjct: 834 VWGRCAQTHIKKLQICQNKLLKLIMNL 860
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 38.7 bits (86), Expect = 0.010
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Frame = -3
Query: 423 MQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTP-------LKLQDCGFEVSTEVYIS 265
MQ+ L +L I +K ++IN NKT + +K P L++ D + +
Sbjct: 663 MQSYLNELDIYYKKWKIKINPNKT-NAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYL 721
Query: 264 GELLSNQGGSDEDIEIRIRKARGAFAQLKP-VWESSVMTRRIKLTLFDSIVKSVLLFGCE 88
G + + I I K L P + S ++ K+ +F +I +L++G
Sbjct: 722 GIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSP 781
Query: 87 TW-RVTKTLTNRLQVFVNKCLRSILRI 10
W R +T +LQ+ NK L+ I+ +
Sbjct: 782 VWGRCAQTHIKKLQICQNKLLKLIMNL 808
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -1
Query: 692 IPNKIIGIIQALYRGSTCRVVHDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDIMREVVT 513
+P G++++ G V + + AGV QG +L PLL+ + D+ + V+
Sbjct: 605 LPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVS 664
Query: 512 TLG 504
G
Sbjct: 665 LYG 667
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -1
Query: 707 LKQRGIPNKIIGIIQALYRGSTCRVVHDQVLGAPIEMTAGVKQGCLLSPLLFIMLLDDIM 528
++ G+P+ I G+I +R V + + +++AGV QG +L P+L+ ++ D I+
Sbjct: 574 MRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH-QVSAGVPQGSVLGPILWNIMYDGIL 632
>DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom body
defect protein protein.
Length = 2501
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -3
Query: 468 DYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQD 301
D ++ VLM+ L+++QAKL++ + + + L ++ N+ V S KL D
Sbjct: 1115 DALENCVLMSTKLEELQAKLQEGQQLVDSQKLELDMNRKELALVKSAYEAQTKLSD 1170
>AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein
protein.
Length = 1871
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -3
Query: 468 DYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQD 301
D ++ VLM+ L+++QAKL++ + + + L ++ N+ V S KL D
Sbjct: 1115 DALENCVLMSTKLEELQAKLQEGQQLVDSQKLELDMNRKELALVKSAYEAQTKLSD 1170
>AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein
protein.
Length = 2501
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -3
Query: 468 DYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQD 301
D ++ VLM+ L+++QAKL++ + + + L ++ N+ V S KL D
Sbjct: 1115 DALENCVLMSTKLEELQAKLQEGQQLVDSQKLELDMNRKELALVKSAYEAQTKLSD 1170
>AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-PC,
isoform C protein.
Length = 1871
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -3
Query: 468 DYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQD 301
D ++ VLM+ L+++QAKL++ + + + L ++ N+ V S KL D
Sbjct: 1115 DALENCVLMSTKLEELQAKLQEGQQLVDSQKLELDMNRKELALVKSAYEAQTKLSD 1170
>AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-PA,
isoform A protein.
Length = 2328
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -3
Query: 468 DYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQD 301
D ++ VLM+ L+++QAKL++ + + + L ++ N+ V S KL D
Sbjct: 1115 DALENCVLMSTKLEELQAKLQEGQQLVDSQKLELDMNRKELALVKSAYEAQTKLSD 1170
>AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-PB,
isoform B protein.
Length = 2520
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -3
Query: 468 DYADDIVLMTPTLDQMQAKLEDLRISAEKRGLRINTNKTVDMRVMSKNTTPLKLQD 301
D ++ VLM+ L+++QAKL++ + + + L ++ N+ V S KL D
Sbjct: 1115 DALENCVLMSTKLEELQAKLQEGQQLVDSQKLELDMNRKELALVKSAYEAQTKLSD 1170
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 495 WSENILEDLDYADDIVLMTP-TLDQMQAKLEDLRISAEKRGLRI 367
W I E LDY D+ M+P LD+ A ++D+ + ++ R+
Sbjct: 4299 WINEIKEKLDYCSDMSSMSPKELDKKLATIQDVILLKDEGSARV 4342
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 495 WSENILEDLDYADDIVLMTP-TLDQMQAKLEDLRISAEKRGLRI 367
W I E LDY D+ M+P LD+ A ++D+ + ++ R+
Sbjct: 4299 WINEIKEKLDYCSDMSSMSPKELDKKLATIQDVILLKDEGSARV 4342
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,785,522
Number of Sequences: 53049
Number of extensions: 895736
Number of successful extensions: 2126
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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