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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0209.Seq
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein.      94   2e-19
AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein.    94   2e-19
AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin ...    94   2e-19
AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin ...    94   2e-19
AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin ...    94   2e-19
AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin ...    94   2e-19
AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB...    94   2e-19
AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA...    94   2e-19
AE014297-4435|AAZ83991.1|  722|Drosophila melanogaster CG33956-P...    32   0.79 
BT016035-1|AAV36920.1|  405|Drosophila melanogaster RE01104p pro...    31   1.8  
AY113319-1|AAM29324.1|  270|Drosophila melanogaster AT28212p pro...    31   1.8  
AE014297-1026|AAF54440.1|  421|Drosophila melanogaster CG9475-PA...    31   1.8  
AE014297-1025|AAN13443.2|  389|Drosophila melanogaster CG9475-PB...    31   1.8  
X17298-1|CAA35185.1| 1129|Drosophila melanogaster RNA polymerase...    29   7.4  
AY075569-1|AAL68376.1| 1129|Drosophila melanogaster SD02110p pro...    29   9.7  
AE014134-97|AAF51503.1| 1129|Drosophila melanogaster CG4033-PA p...    29   9.7  

>Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein.
          Length = 1365

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308  QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
            QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 745  QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804

Query: 485  FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
            FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 805  FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679


>AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein.
          Length = 1365

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308  QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
            QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 745  QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804

Query: 485  FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
            FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 805  FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679


>AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin
            protein.
          Length = 1365

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308  QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
            QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 745  QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804

Query: 485  FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
            FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 805  FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679


>AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin
            protein.
          Length = 1349

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308  QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
            QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 729  QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 788

Query: 485  FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
            FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 789  FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 837



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 591 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 650

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 651 MLHSVWQMRCVNE 663


>AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin
            protein.
          Length = 1349

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308  QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
            QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 729  QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 788

Query: 485  FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
            FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 789  FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 837



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 591 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 650

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 651 MLHSVWQMRCVNE 663


>AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin
            protein.
          Length = 1365

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308  QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
            QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 745  QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804

Query: 485  FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
            FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 805  FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679


>AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB,
           isoform B protein.
          Length = 1123

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308 QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
           QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 503 QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 562

Query: 485 FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
           FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 563 FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 611



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 365 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 424

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 425 MLHSVWQMRCVNE 437


>AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA,
            isoform A protein.
          Length = 1365

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
 Frame = +2

Query: 308  QRTLAPQHS-EEYTSLNALKLFVSMAIEMLNLWRVLCEHQFHVIAASLPADQQNALQAAS 484
            QR L+ Q   EE  SL+AL LFV  A E+++LW +L  H F +I   L  + Q  L  ++
Sbjct: 745  QRVLSEQAQVEETRSLSALNLFVKHACEVISLWNILNSHSFQLICVQLSPEHQKLLTCST 804

Query: 485  FRELLVGRQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQXD 631
            FR+LL+ R EV   L+ SL+  YL+D A V  +S+ LR+ CP LYR  D
Sbjct: 805  FRDLLITRSEVCAFLIISLINLYLKDAAGVSEVSKNLRENCPNLYRHED 853



 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = +3

Query: 15  MMTQQPQ-YSMSPTPYNQTSFN------GNITQQQ-RDPNYPVPIEFSAKHNGLYIYVGR 170
           M T  P   + SP  +  + FN      GN+   Q    N   PI FSAKH+GLY+YV R
Sbjct: 607 MSTPMPNSVANSPVGFPGSQFNQPISPIGNMQPPQVAVSNENSPIVFSAKHDGLYMYVSR 666

Query: 171 ILLPIWNLKCVSK 209
           +L  +W ++CV++
Sbjct: 667 MLHSVWQMRCVNE 679


>AE014297-4435|AAZ83991.1|  722|Drosophila melanogaster CG33956-PD,
           isoform D protein.
          Length = 722

 Score = 32.3 bits (70), Expect = 0.79
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +3

Query: 9   HSMMTQQPQYSMSPTPYNQTSFNGNITQQQRDPNYPVPIEFSAKHNGLY 155
           +  +TQQPQ     T Y Q ++N N TQQQ+   + VP   S  ++  Y
Sbjct: 98  NQQLTQQPQQQQQQTQYMQHNYN-NYTQQQQQ-QHLVPATTSQSNSHFY 144


>BT016035-1|AAV36920.1|  405|Drosophila melanogaster RE01104p
           protein.
          Length = 405

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
           SV  H+Q +C  D++PP+    +SML P ++P I
Sbjct: 116 SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 149


>AY113319-1|AAM29324.1|  270|Drosophila melanogaster AT28212p
           protein.
          Length = 270

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
           SV  H+Q +C  D++PP+    +SML P ++P I
Sbjct: 69  SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 102


>AE014297-1026|AAF54440.1|  421|Drosophila melanogaster CG9475-PA,
           isoform A protein.
          Length = 421

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
           SV  H+Q +C  D++PP+    +SML P ++P I
Sbjct: 116 SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 149


>AE014297-1025|AAN13443.2|  389|Drosophila melanogaster CG9475-PB,
           isoform B protein.
          Length = 389

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 590 SVKFHRQKHCHADILPPKI-LEVSMLLPADQPVI 492
           SV  H+Q +C  D++PP+    +SML P ++P I
Sbjct: 100 SVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDI 133


>X17298-1|CAA35185.1| 1129|Drosophila melanogaster RNA polymerase 3,
           second  largestsubunit protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +3

Query: 117 VPIEFSAKHNGLYIYVG--RILLPIWNLK 197
           +P + + +  GLYI  G  R++ P+WNLK
Sbjct: 597 IPFKKNGQFPGLYIATGPARLMRPVWNLK 625


>AY075569-1|AAL68376.1| 1129|Drosophila melanogaster SD02110p
           protein.
          Length = 1129

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +3

Query: 117 VPIEFSAKHNGLYIYVG--RILLPIWNLK 197
           +P + + +  GLYI  G  R++ P+WNLK
Sbjct: 597 IPFKKNGQFPGLYIATGPARMMRPVWNLK 625


>AE014134-97|AAF51503.1| 1129|Drosophila melanogaster CG4033-PA
           protein.
          Length = 1129

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +3

Query: 117 VPIEFSAKHNGLYIYVG--RILLPIWNLK 197
           +P + + +  GLYI  G  R++ P+WNLK
Sbjct: 597 IPFKKNGQFPGLYIATGPARMMRPVWNLK 625


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,679,994
Number of Sequences: 53049
Number of extensions: 764814
Number of successful extensions: 2136
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2136
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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