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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0040.Seq
         (347 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p pro...   147   4e-36
AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p pro...   147   4e-36
AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC...   147   4e-36
D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine rece...    28   3.7  
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece...    28   3.7  
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece...    28   3.7  
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece...    28   3.7  
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD...    28   3.7  
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC...    28   3.7  
AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB...    28   3.7  
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA...    28   3.7  
AY069780-1|AAL39925.1|  741|Drosophila melanogaster SD02338p pro...    27   8.6  
AY069301-1|AAL39446.1|  518|Drosophila melanogaster HL03404p pro...    27   8.6  
AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA ...    27   8.6  

>AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p
           protein.
          Length = 208

 Score =  147 bits (356), Expect = 4e-36
 Identities = 71/115 (61%), Positives = 82/115 (71%)
 Frame = +3

Query: 3   RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
           RD  HKRRATGGKR  +RKKRK+ELGRPAANT+LG  R+H VR+RGGNTK RALRL+TGN
Sbjct: 5   RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64

Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
           F+W SE   RKTRI DVVYNASNN     + L +  +          WYE+HY L
Sbjct: 65  FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119


>AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p
           protein.
          Length = 208

 Score =  147 bits (356), Expect = 4e-36
 Identities = 71/115 (61%), Positives = 82/115 (71%)
 Frame = +3

Query: 3   RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
           RD  HKRRATGGKR  +RKKRK+ELGRPAANT+LG  R+H VR+RGGNTK RALRL+TGN
Sbjct: 5   RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64

Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
           F+W SE   RKTRI DVVYNASNN     + L +  +          WYE+HY L
Sbjct: 65  FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119


>AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC
           protein.
          Length = 208

 Score =  147 bits (356), Expect = 4e-36
 Identities = 71/115 (61%), Positives = 82/115 (71%)
 Frame = +3

Query: 3   RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
           RD  HKRRATGGKR  +RKKRK+ELGRPAANT+LG  R+H VR+RGGNTK RALRL+TGN
Sbjct: 5   RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64

Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
           F+W SE   RKTRI DVVYNASNN     + L +  +          WYE+HY L
Sbjct: 65  FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119


>D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5112

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4279 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4323


>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5112

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4279 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4323


>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5126

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4293 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4337


>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5126

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4293 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4337


>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
            isoform D protein.
          Length = 5113

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4280 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4324


>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
            isoform C protein.
          Length = 5127

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4294 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4338


>AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB,
            isoform B protein.
          Length = 5113

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4280 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4324


>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
            isoform A protein.
          Length = 5127

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 88   LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
            L+T GSVL+   PF+  +EIL + + +      + D N+ Q  KP
Sbjct: 4294 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4338


>AY069780-1|AAL39925.1|  741|Drosophila melanogaster SD02338p
           protein.
          Length = 741

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = +1

Query: 28  PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 204
           P  GN  P +  G+ +   P+ +PGS  S    P   V EI   +     P   +G   +
Sbjct: 449 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 506

Query: 205 QLAKPVSLMLCIMH 246
            L     L+ C  H
Sbjct: 507 ALNHGSVLIECAKH 520


>AY069301-1|AAL39446.1|  518|Drosophila melanogaster HL03404p
           protein.
          Length = 518

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = +1

Query: 28  PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 204
           P  GN  P +  G+ +   P+ +PGS  S    P   V EI   +     P   +G   +
Sbjct: 226 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 283

Query: 205 QLAKPVSLMLCIMH 246
            L     L+ C  H
Sbjct: 284 ALNHGSVLIECAKH 297


>AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA
            protein.
          Length = 2252

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = +1

Query: 28   PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 204
            P  GN  P +  G+ +   P+ +PGS  S    P   V EI   +     P   +G   +
Sbjct: 1960 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 2017

Query: 205  QLAKPVSLMLCIMH 246
             L     L+ C  H
Sbjct: 2018 ALNHGSVLIECAKH 2031


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,303,061
Number of Sequences: 53049
Number of extensions: 400515
Number of successful extensions: 1030
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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