Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0014.Seq
         (338 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023178-1|AAY55594.1|  283|Drosophila melanogaster IP09525p pro...    27   8.2  
AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA...    27   8.2  
AE014297-1465|AAF54764.2|  283|Drosophila melanogaster CG12256-P...    27   8.2  

>BT023178-1|AAY55594.1|  283|Drosophila melanogaster IP09525p
           protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 189 SRLWEYQFNEEYKCFVDNDVVLLKI 115
           S++  Y+ NE Y+  V +D+ +LKI
Sbjct: 120 SQVQSYEMNENYQELVTSDIAILKI 144


>AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA
           protein.
          Length = 213

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 9   MCIFG--VQCVKLTNKVQPQYFDTYYFNIKCYYYILLEFSIK 128
           +C+ G  V CV ++ +         YF I   Y+ILL F++K
Sbjct: 166 VCVIGFCVVCVYISYEYNACIIKILYFMITLRYFILLIFNLK 207


>AE014297-1465|AAF54764.2|  283|Drosophila melanogaster CG12256-PA
           protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 189 SRLWEYQFNEEYKCFVDNDVVLLKI 115
           S++  Y+ NE Y+  V +D+ +LKI
Sbjct: 120 SQVQSYEMNENYQELVTSDIAILKI 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,994,488
Number of Sequences: 53049
Number of extensions: 185249
Number of successful extensions: 355
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)