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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C09
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   363   e-100
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   363   e-100
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   363   e-100
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   334   6e-92
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   334   6e-92
AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD...   242   3e-64
AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC...   206   2e-53

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  363 bits (893), Expect = e-100
 Identities = 160/209 (76%), Positives = 181/209 (86%)
 Frame = +1

Query: 28  SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 207
           + MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VR
Sbjct: 10  TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVR 69

Query: 208 EPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF 387
           E DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRF
Sbjct: 70  EADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRF 129

Query: 388 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKA 567
           YKNWY             W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKA
Sbjct: 130 YKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKA 189

Query: 568 HIMEIQLNGGTIEDKVKWAXEHLEKPIPV 654
           H+MEIQLNGG+IEDKVKWA EHLEKPI V
Sbjct: 190 HVMEIQLNGGSIEDKVKWAREHLEKPIQV 218


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  363 bits (892), Expect = e-100
 Identities = 160/207 (77%), Positives = 180/207 (86%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
           NWY             W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 574 MEIQLNGGTIEDKVKWAXEHLEKPIPV 654
           MEIQLNGG+IEDKVKWA EHLEKPI V
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQV 207


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  363 bits (892), Expect = e-100
 Identities = 160/207 (77%), Positives = 180/207 (86%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
           NWY             W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180

Query: 574 MEIQLNGGTIEDKVKWAXEHLEKPIPV 654
           MEIQLNGG+IEDKVKWA EHLEKPI V
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQV 207


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  334 bits (821), Expect = 6e-92
 Identities = 147/194 (75%), Positives = 167/194 (86%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 432
           EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY          
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120

Query: 433 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 612
              W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180

Query: 613 VKWAXEHLEKPIPV 654
           VKWA EHLEKPI V
Sbjct: 181 VKWAREHLEKPIQV 194


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  334 bits (821), Expect = 6e-92
 Identities = 147/194 (75%), Positives = 167/194 (86%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 432
           EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY          
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120

Query: 433 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 612
              W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180

Query: 613 VKWAXEHLEKPIPV 654
           VKWA EHLEKPI V
Sbjct: 181 VKWAREHLEKPIQV 194


>AE014297-1263|AAF54612.2|  161|Drosophila melanogaster CG4863-PD,
           isoform D protein.
          Length = 161

 Score =  242 bits (592), Expect = 3e-64
 Identities = 105/123 (85%), Positives = 114/123 (92%)
 Frame = +1

Query: 34  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
           MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60

Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
           DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61  DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120

Query: 394 NWY 402
           NWY
Sbjct: 121 NWY 123


>AE014297-1266|AAF54611.1|  125|Drosophila melanogaster CG4863-PC,
           isoform C protein.
          Length = 125

 Score =  206 bits (503), Expect = 2e-53
 Identities = 90/108 (83%), Positives = 99/108 (91%)
 Frame = +1

Query: 73  MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 252
           M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1   MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60

Query: 253 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
           EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61  EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,245,447
Number of Sequences: 53049
Number of extensions: 665990
Number of successful extensions: 1519
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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