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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0046
         (569 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen pr...    55   6e-08
AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p pro...    53   3e-07
AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative pro...    53   3e-07
AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA...    53   3e-07
AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB...    52   5e-07
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent...    32   0.63 
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P...    32   0.63 

>AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen
           protein.
          Length = 609

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
 Frame = +1

Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
           +LS  DW S+++  +S  +NVDSP+A +R+  ++    ++++   L  V  +M+ + G E
Sbjct: 54  ILSGSDWNSKVIFTMSD-VNVDSPNAKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112

Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
           + NLA I+    +    PS  W        P L +  +          +A  N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171

Query: 490 KFHERLDWDKRVGVVLEL 543
                     +V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189


>AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p
           protein.
          Length = 610

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
 Frame = +1

Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
           +LS  DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E
Sbjct: 54  ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112

Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
           + NLA I+    +    PS  W        P L +  +          +A  N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171

Query: 490 KFHERLDWDKRVGVVLEL 543
                     +V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189


>AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative
           protein methyltransferaseJBP1 protein.
          Length = 610

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
 Frame = +1

Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
           +LS  DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E
Sbjct: 54  ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112

Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
           + NLA I+    +    PS  W        P L +  +          +A  N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171

Query: 490 KFHERLDWDKRVGVVLEL 543
                     +V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189


>AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA,
           isoform A protein.
          Length = 610

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
 Frame = +1

Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
           +LS  DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E
Sbjct: 54  ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112

Query: 328 SNNLARILQTYYETSHHPSLIW-----ACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWS 489
           + NLA I+    +    PS  W        P L +  +          +A  N+PW WW+
Sbjct: 113 NENLASIVLAKTK-DDFPSGNWFIQVPITNPELATFEHRKDATAEEVAEAESNDPWNWWN 171

Query: 490 KFHERLDWDKRVGVVLEL 543
                     +V VV+EL
Sbjct: 172 NLRMVTKHSTKVKVVIEL 189


>AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB,
           isoform B protein.
          Length = 605

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
 Frame = +1

Query: 151 VLSPQDWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRE 327
           +LS  DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E
Sbjct: 54  ILSGSDWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPE 112

Query: 328 SNNLARILQTYYETSHHPSLIWACVPMLCSRTYXXXXXXXXXXKA-WNEPWYWWSKFHER 504
           + NLA I+    + +     +    P L +  +          +A  N+PW WW+     
Sbjct: 113 NENLASIVLAKTKGNWFIQ-VPITNPELATFEHRKDATAEEVAEAESNDPWNWWNNLRMV 171

Query: 505 LDWDKRVGVVLEL 543
                +V VV+EL
Sbjct: 172 TKHSTKVKVVIEL 184


>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
           centrosomal protein protein.
          Length = 2726

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 232 VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 339
           V+++ +DYLN++++ CR LG   + I+    ES  L
Sbjct: 665 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 700


>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
           isoform B protein.
          Length = 2897

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 232 VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 339
           V+++ +DYLN++++ CR LG   + I+    ES  L
Sbjct: 836 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 871


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,937,966
Number of Sequences: 53049
Number of extensions: 550967
Number of successful extensions: 1204
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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