Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120063.Seq
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061077-1|AAL28625.1|  487|Drosophila melanogaster LD05472p pro...    34   0.19 
AF099184-1|AAD39863.1|  292|Drosophila melanogaster homeobox pro...    34   0.19 
AE013599-571|AAF59147.3|  487|Drosophila melanogaster CG18455-PA...    34   0.19 
BT016157-1|AAV37042.1|  751|Drosophila melanogaster AT13626p pro...    29   7.2  
AY051761-1|AAK93185.1|  475|Drosophila melanogaster LD29083p pro...    29   7.2  
AY051734-1|AAK93158.1|  718|Drosophila melanogaster LD26240p pro...    29   7.2  
AE014134-1859|AAF52930.2|  475|Drosophila melanogaster CG5091-PA...    29   7.2  
AE013599-884|AAF58923.1|  718|Drosophila melanogaster CG1868-PA,...    29   7.2  
AE013599-883|AAM71072.1|  751|Drosophila melanogaster CG1868-PB,...    29   7.2  

>AY061077-1|AAL28625.1|  487|Drosophila melanogaster LD05472p
           protein.
          Length = 487

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -1

Query: 304 LPQTHDYLPCNSCLYIRHHIAHVLGKYNFKRLYFTFFNHKHVITSLGHM 158
           LP  H+ L C + L  R  +A+ +G  NF+ LY    NHK    S G +
Sbjct: 69  LPNMHEILNCEAVLRARAVVAYHVG--NFRELYAIIENHKFTKASYGKL 115


>AF099184-1|AAD39863.1|  292|Drosophila melanogaster homeobox
           protein SIX3 protein.
          Length = 292

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -1

Query: 304 LPQTHDYLPCNSCLYIRHHIAHVLGKYNFKRLYFTFFNHKHVITSLGHM 158
           LP  H+ L C + L  R  +A+ +G  NF+ LY    NHK    S G +
Sbjct: 69  LPNMHEILNCEAVLRARAVVAYHVG--NFRELYAIIENHKFTKASYGKL 115


>AE013599-571|AAF59147.3|  487|Drosophila melanogaster CG18455-PA,
           isoform A protein.
          Length = 487

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -1

Query: 304 LPQTHDYLPCNSCLYIRHHIAHVLGKYNFKRLYFTFFNHKHVITSLGHM 158
           LP  H+ L C + L  R  +A+ +G  NF+ LY    NHK    S G +
Sbjct: 69  LPNMHEILNCEAVLRARAVVAYHVG--NFRELYAIIENHKFTKASYGKL 115


>BT016157-1|AAV37042.1|  751|Drosophila melanogaster AT13626p
           protein.
          Length = 751

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 659 CIAVCESNIKV-FGKCKVSRQSPKQICGGQFKFNCY 763
           C   CE +I+  F  C V   + K I  G+  FNCY
Sbjct: 485 CNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCY 520


>AY051761-1|AAK93185.1|  475|Drosophila melanogaster LD29083p
           protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -2

Query: 396 LVVAHILRMRNFYAGFFNQIVRNHKSNFIKRYHKHTIIYHVIVVCIFDTTLLTYLANI 223
           + +A ILR R + A FF  +  N+K   ++ YH       ++  C+   +  +++A I
Sbjct: 175 VAIAAILRRRFYAAAFFFTLALNYKQ--MELYHSLPFFAFLLGECVSQKSFASFIAEI 230


>AY051734-1|AAK93158.1|  718|Drosophila melanogaster LD26240p
           protein.
          Length = 718

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 659 CIAVCESNIKV-FGKCKVSRQSPKQICGGQFKFNCY 763
           C   CE +I+  F  C V   + K I  G+  FNCY
Sbjct: 452 CNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCY 487


>AE014134-1859|AAF52930.2|  475|Drosophila melanogaster CG5091-PA
           protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -2

Query: 396 LVVAHILRMRNFYAGFFNQIVRNHKSNFIKRYHKHTIIYHVIVVCIFDTTLLTYLANI 223
           + +A ILR R + A FF  +  N+K   ++ YH       ++  C+   +  +++A I
Sbjct: 175 VAIAAILRRRFYAAAFFFTLALNYKQ--MELYHSLPFFAFLLGECVSQKSFASFIAEI 230


>AE013599-884|AAF58923.1|  718|Drosophila melanogaster CG1868-PA,
           isoform A protein.
          Length = 718

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 659 CIAVCESNIKV-FGKCKVSRQSPKQICGGQFKFNCY 763
           C   CE +I+  F  C V   + K I  G+  FNCY
Sbjct: 452 CNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCY 487


>AE013599-883|AAM71072.1|  751|Drosophila melanogaster CG1868-PB,
           isoform B protein.
          Length = 751

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 659 CIAVCESNIKV-FGKCKVSRQSPKQICGGQFKFNCY 763
           C   CE +I+  F  C V   + K I  G+  FNCY
Sbjct: 485 CNHACEPSIRTKFDGCSVVNYAAKDILEGEEIFNCY 520


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,206,557
Number of Sequences: 53049
Number of extensions: 703930
Number of successful extensions: 1730
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)