Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A16
(854 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 159 4e-39
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 159 4e-39
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 139 5e-33
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 129 4e-30
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 129 5e-30
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 129 5e-30
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 124 2e-28
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 120 3e-27
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 120 3e-27
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 120 3e-27
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 120 3e-27
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 120 3e-27
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 118 8e-27
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 118 1e-26
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 118 1e-26
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 118 1e-26
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 118 1e-26
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 118 1e-26
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 117 2e-26
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 116 4e-26
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 94 3e-19
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 85 9e-17
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 71 2e-12
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 58 2e-08
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 56 6e-08
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 56 8e-08
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 40 0.003
AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC... 33 0.50
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA... 33 0.50
BT022902-1|AAY55318.1| 571|Drosophila melanogaster IP12601p pro... 30 3.5
BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p pro... 30 3.5
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro... 30 3.5
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA... 30 3.5
AE014134-304|AAF51336.2| 482|Drosophila melanogaster CG31664-PA... 30 3.5
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 29 6.2
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 29 6.2
BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p pro... 29 6.2
BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p pro... 29 6.2
AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA... 29 6.2
AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB... 29 6.2
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 29 6.2
DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12 pro... 29 8.1
AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro... 29 8.1
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ... 29 8.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 159 bits (386), Expect = 4e-39
Identities = 81/223 (36%), Positives = 131/223 (58%)
Frame = +1
Query: 115 GTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLT 294
G + DI AFD VWH+GL++KL +G P L+ I+++FL++R F + ++S R L
Sbjct: 604 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 663
Query: 295 AGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLG 474
AGVPQGS L P LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L
Sbjct: 664 AGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 723
Query: 475 QWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKV 654
+++KW+I INP K+ A+ F + R P +P R R + PI WV +
Sbjct: 724 IYYKKWKIKINPNKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNI 770
Query: 655 KYLGVTLDRGMTFRPHIKTVRXRAAFILGRLYPMLCXRXKLAL 783
+YLG+ D+ +TF+ HI + I+ LYP++ + KL++
Sbjct: 771 RYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSI 813
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 159 bits (386), Expect = 4e-39
Identities = 81/223 (36%), Positives = 131/223 (58%)
Frame = +1
Query: 115 GTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLT 294
G + DI AFD VWH+GL++KL +G P L+ I+++FL++R F + ++S R L
Sbjct: 552 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 611
Query: 295 AGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLG 474
AGVPQGS L P LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L
Sbjct: 612 AGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 671
Query: 475 QWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKV 654
+++KW+I INP K+ A+ F + R P +P R R + PI WV +
Sbjct: 672 IYYKKWKIKINPNKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNI 718
Query: 655 KYLGVTLDRGMTFRPHIKTVRXRAAFILGRLYPMLCXRXKLAL 783
+YLG+ D+ +TF+ HI + I+ LYP++ + KL++
Sbjct: 719 RYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSI 761
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 139 bits (336), Expect = 5e-33
Identities = 87/255 (34%), Positives = 134/255 (52%), Gaps = 8/255 (3%)
Frame = +1
Query: 46 VQQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 225
V+QVHRLT+HIL + ++ +F D+ +AFD+VWH+GLI K+ + P +++
Sbjct: 559 VEQVHRLTKHILQAFDDKEYC--NAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLK 615
Query: 226 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETH--------L 381
+L +R F RV + S PR + AGVPQGS L PLL+S++ D+P H L
Sbjct: 616 SYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALL 675
Query: 382 ALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
A +ADD A+ YS + R LQ + TL W ++W + +NP K+
Sbjct: 676 ATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTIN------------ 723
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
P + + + +PI L G + S+ KYLG+TLD+ +TF PH+K R +
Sbjct: 724 ---PCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQ 780
Query: 742 RLYPMLCXRXKLALR 786
+L +L + + LR
Sbjct: 781 QLRWLLNRKSTMTLR 795
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 129 bits (312), Expect = 4e-30
Identities = 88/261 (33%), Positives = 127/261 (48%), Gaps = 7/261 (2%)
Frame = +1
Query: 46 VQQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 225
V+Q+HR+ E IL + ++ +LF DI +AFD+VWH GL K+ +P +++
Sbjct: 558 VEQLHRVVEQILTAYDSKEYC--NSLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLK 614
Query: 226 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSP-----ETHLALF 390
+L R F R S + AGVPQGS L PLL+ LY +D+P+ ++ LA F
Sbjct: 615 SYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATF 674
Query: 391 ADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLF--KRGRPPNITS 564
ADD + Y R +Q +W R+W I IN +KS V F KR PP
Sbjct: 675 ADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRRTPP---- 730
Query: 565 SIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILGR 744
P+ + P+P + KYLGV LDR +TF H+ +R R + +
Sbjct: 731 ---------------PVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAK 775
Query: 745 LYPMLCXRXKLALRX*GTLXK 807
Y +L R KL+L T+ K
Sbjct: 776 HYWLLSSRSKLSLSNKLTIYK 796
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 129 bits (311), Expect = 5e-30
Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 8/253 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
+Q+HR+ L + K+ G F DI +AFD+VWH GL+YK + P +L L+++
Sbjct: 561 EQLHRVVNFALEAMEN-KEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKS 617
Query: 229 FLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP-RSPETH-------LA 384
FL R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T +A
Sbjct: 618 FLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIA 677
Query: 385 LFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITS 564
+ADDTA+ + + LQ + QW W + IN K A V F N T
Sbjct: 678 TYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF-----ANRTG 732
Query: 565 SIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILGR 744
S P ++L G+ I KYLG+TLDR +TF HI ++ + R
Sbjct: 733 SCP------------GVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVAR 780
Query: 745 LYPMLCXRXKLAL 783
+ ++ R KL+L
Sbjct: 781 MSWLIAPRNKLSL 793
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 129 bits (311), Expect = 5e-30
Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 8/253 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
+Q+HR+ L + K+ G F DI +AFD+VWH GL+YK + P +L L+++
Sbjct: 363 EQLHRVVNFALEAMEN-KEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKS 419
Query: 229 FLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP-RSPETH-------LA 384
FL R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T +A
Sbjct: 420 FLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIA 479
Query: 385 LFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITS 564
+ADDTA+ + + LQ + QW W + IN K A V F N T
Sbjct: 480 TYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF-----ANRTG 534
Query: 565 SIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILGR 744
S P ++L G+ I KYLG+TLDR +TF HI ++ + R
Sbjct: 535 SCP------------GVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVAR 582
Query: 745 LYPMLCXRXKLAL 783
+ ++ R KL+L
Sbjct: 583 MSWLIAPRNKLSL 595
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 124 bits (298), Expect = 2e-28
Identities = 84/252 (33%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
QQ+ R+T+ IL R++ +F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 616 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 672
Query: 229 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL 387
+L+NR+F + + G SR Q+ AGVPQGS L PLL+S++ +D+P SP + L
Sbjct: 673 YLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIML 732
Query: 388 --FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
+ADDT + S + R + + T W KW I +N K+ V+F +
Sbjct: 733 STYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIF------TLK 786
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
+ +P S + + GQ I SK YLGVTLD +T H+ + + +
Sbjct: 787 NDLPTNSMN--------VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYR 838
Query: 742 RLYPMLCXRXKL 777
+L +L R KL
Sbjct: 839 KLTWILNGRSKL 850
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 120 bits (288), Expect = 3e-27
Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
QQ+ R+T+ IL R++ +F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 488 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 544
Query: 229 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL 387
+L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P SP + L
Sbjct: 545 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIML 604
Query: 388 --FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
+ADDT + S + R + + T W KW I +N K+ V++ +
Sbjct: 605 STYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY------TLK 658
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
+ IP + + + + GQ I SK YLGV LD +T PH+ V +
Sbjct: 659 NDIP--------TNLKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYR 710
Query: 742 RLYPMLCXRXKL 777
++ +L R KL
Sbjct: 711 KMSWILNERSKL 722
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 120 bits (288), Expect = 3e-27
Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
QQ+ R+T+ IL R++ +F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 229 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL 387
+L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P SP + L
Sbjct: 661 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIML 720
Query: 388 --FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
+ADDT + S + R + + T W KW I +N K+ V++ +
Sbjct: 721 STYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY------TLK 774
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
+ IP + + + + GQ I SK YLGV LD +T PH+ V +
Sbjct: 775 NDIP--------TNLKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYR 826
Query: 742 RLYPMLCXRXKL 777
++ +L R KL
Sbjct: 827 KMSWILNERSKL 838
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 120 bits (288), Expect = 3e-27
Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
QQ+ R+T+ IL R++ +F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 229 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL 387
+L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P SP + L
Sbjct: 661 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIML 720
Query: 388 --FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
+ADDT + S + R + + T W KW I +N K+ V++ +
Sbjct: 721 STYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY------TLK 774
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
+ IP + + + + GQ I SK YLGV LD +T PH+ V +
Sbjct: 775 NDIP--------TNLKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYR 826
Query: 742 RLYPMLCXRXKL 777
++ +L R KL
Sbjct: 827 KMSWILNERSKL 838
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 120 bits (288), Expect = 3e-27
Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
QQ+ R+T+ IL R++ +F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 566 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 622
Query: 229 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL 387
+L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P SP + L
Sbjct: 623 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIML 682
Query: 388 --FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
+ADDT + S + R + + T W KW I +N K+ V++ +
Sbjct: 683 STYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY------TLK 736
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
+ IP + + + + GQ I SK YLGV LD +T PH+ V +
Sbjct: 737 NDIP--------TNLKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYR 788
Query: 742 RLYPMLCXRXKL 777
++ +L R KL
Sbjct: 789 KMSWILNERSKL 800
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 120 bits (288), Expect = 3e-27
Identities = 82/252 (32%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
QQ+ R+T+ IL R++ +F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 229 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL 387
+L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P SP + L
Sbjct: 661 YLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIML 720
Query: 388 --FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
+ADDT + S + R + + T W KW I +N K+ V++ +
Sbjct: 721 STYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY------TLK 774
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
+ IP + + + + GQ I SK YLGV LD +T PH+ V +
Sbjct: 775 NDIP--------TNLKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYR 826
Query: 742 RLYPMLCXRXKL 777
++ +L R KL
Sbjct: 827 KMSWILNERSKL 838
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 118 bits (285), Expect = 8e-27
Identities = 77/246 (31%), Positives = 117/246 (47%)
Frame = +1
Query: 46 VQQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 225
++QV+R+T I R+ +F D+A+AFD+VW +GL++K+ + +P +++
Sbjct: 554 IEQVNRITSEIRTAFEHREYCTA--IFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLK 610
Query: 226 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTA 405
+L NR F R + + SR + AGVPQGS L P+L++LY D P + FADDTA
Sbjct: 611 SYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTA 670
Query: 406 IYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSR 585
I + L + ++ +W WRI IN K V F
Sbjct: 671 ILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF----------------- 713
Query: 586 RANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILGRLYPMLCX 765
N P+ L IP +V YLGV LDR +T+R HI+ L+ ++
Sbjct: 714 TLNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINA 773
Query: 766 RXKLAL 783
R L+L
Sbjct: 774 RSPLSL 779
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 118 bits (284), Expect = 1e-26
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 3/249 (1%)
Frame = +1
Query: 46 VQQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 225
++QV+R+T I R+ +F D+++AFDKVW +GL++K+ + +P+ +++
Sbjct: 556 IEQVNRITTEIRTAFEYREYCTA--VFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLK 612
Query: 226 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTA 405
+L +R F R S + AGVPQGS L P L+ +Y DIP + ++ FADDTA
Sbjct: 613 SYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTA 672
Query: 406 IYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGR---PPNITSSIPL 576
I R +L + + + +W WRI +N K V F R PP + +SIPL
Sbjct: 673 ILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFTLNRQDCPPLLLNSIPL 732
Query: 577 RSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILGRLYPM 756
P +V YLGV LDR +T+R HI+ + + L+ +
Sbjct: 733 --------------------PKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWL 772
Query: 757 LCXRXKLAL 783
+ L+L
Sbjct: 773 INSGSPLSL 781
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 118 bits (284), Expect = 1e-26
Identities = 81/241 (33%), Positives = 128/241 (53%), Gaps = 17/241 (7%)
Frame = +1
Query: 52 QVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 231
Q+ R+T+ IL + K + + T F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 161 QLARVTQFILKAFDE-KDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 217
Query: 232 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS-----------PET 375
LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P P+
Sbjct: 218 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDY 277
Query: 376 H-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKR 540
H LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 278 HPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL 337
Query: 541 GRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRX 720
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++
Sbjct: 338 --------------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 383
Query: 721 R 723
+
Sbjct: 384 K 384
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 118 bits (284), Expect = 1e-26
Identities = 81/241 (33%), Positives = 128/241 (53%), Gaps = 17/241 (7%)
Frame = +1
Query: 52 QVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 231
Q+ R+T+ IL + K + + T F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 608 QLARVTQFILKAFDE-KDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 664
Query: 232 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS-----------PET 375
LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P P+
Sbjct: 665 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDY 724
Query: 376 H-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKR 540
H LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 725 HPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL 784
Query: 541 GRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRX 720
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++
Sbjct: 785 --------------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 830
Query: 721 R 723
+
Sbjct: 831 K 831
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 118 bits (284), Expect = 1e-26
Identities = 81/241 (33%), Positives = 128/241 (53%), Gaps = 17/241 (7%)
Frame = +1
Query: 52 QVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 231
Q+ R+T+ IL + K + + T F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 608 QLARVTQFILKAFDE-KDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 664
Query: 232 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS-----------PET 375
LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P P+
Sbjct: 665 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDY 724
Query: 376 H-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKR 540
H LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 725 HPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL 784
Query: 541 GRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRX 720
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++
Sbjct: 785 --------------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 830
Query: 721 R 723
+
Sbjct: 831 K 831
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 118 bits (284), Expect = 1e-26
Identities = 81/241 (33%), Positives = 128/241 (53%), Gaps = 17/241 (7%)
Frame = +1
Query: 52 QVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDF 231
Q+ R+T+ IL + K + + T F DI +AFD+VWH+GL+YKL + +P L ++ ++
Sbjct: 608 QLARVTQFILKAFDE-KDVCSAT-FLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENY 664
Query: 232 LSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS-----------PET 375
LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P P+
Sbjct: 665 LSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDY 724
Query: 376 H-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKR 540
H LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 725 HPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL 784
Query: 541 GRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRX 720
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++
Sbjct: 785 --------------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 830
Query: 721 R 723
+
Sbjct: 831 K 831
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 117 bits (282), Expect = 2e-26
Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Frame = +1
Query: 49 QQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 228
QQ+ R+T+ IL R++ +F DI++AFD+VWH GL+ KL + +P L +I+
Sbjct: 604 QQIARVTQFILEAFERKEYC--SAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILES 660
Query: 229 FLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RSPETHLAL 387
+L+NR+F + + G SR Q+ AGVPQGS L PLL+S++ +D+P SP + L
Sbjct: 661 YLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIML 720
Query: 388 --FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNIT 561
+ADDT + S + R + + + W KW I +N K+ V+F +
Sbjct: 721 STYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIF------TLK 774
Query: 562 SSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILG 741
+ +P +++ + + GQ I SK YLGV LD +T H+ + +
Sbjct: 775 NDLP--------TSLRTMKIKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYR 826
Query: 742 RLYPMLCXRXKL 777
++ +L R KL
Sbjct: 827 KMTWILNRRSKL 838
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 116 bits (279), Expect = 4e-26
Identities = 76/246 (30%), Positives = 116/246 (47%)
Frame = +1
Query: 46 VQQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 225
++QV+R+T I R+ +F D+A+AFD+VW +GL++K+ + +P +++
Sbjct: 554 IEQVNRITSEIRTAFEHREYCTA--IFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLK 610
Query: 226 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTA 405
+L N F R + + SR + AGVPQGS L P+L++LY D P + FADDTA
Sbjct: 611 SYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTA 670
Query: 406 IYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSR 585
I + L + ++ +W WRI IN K V F
Sbjct: 671 ILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF----------------- 713
Query: 586 RANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILGRLYPMLCX 765
N P+ L IP +V YLGV LDR +T+R HI+ L+ ++
Sbjct: 714 TLNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINA 773
Query: 766 RXKLAL 783
R L+L
Sbjct: 774 RSPLSL 779
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 93.9 bits (223), Expect = 3e-19
Identities = 46/121 (38%), Positives = 73/121 (60%)
Frame = +1
Query: 46 VQQVHRLTEHILIGLNRRKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIR 225
++QV+R+T I R+ LF D+A+AFD+VW +GL++K+ + +P + +++
Sbjct: 95 IEQVNRITTEIRTAFEHREYCTA--LFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLK 151
Query: 226 DFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTA 405
+L R F R + S + AGVPQGS L P+L++LY DIP + + + FADDTA
Sbjct: 152 SYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTIFTFADDTA 211
Query: 406 I 408
I
Sbjct: 212 I 212
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 85.4 bits (202), Expect = 9e-17
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Frame = +1
Query: 130 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 309
D +AFD+V + ++ +L G+ RL +I+ F++NRSFR R+ S L G+PQ
Sbjct: 584 DFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQ 643
Query: 310 GSALSPLLFSLYINDI----PRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQ 477
GS LS +LF + I DI R + +++L+ADD I+ + ++ + + + +
Sbjct: 644 GSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQEINS 703
Query: 478 WFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVK 657
W T A++ ++ + +I R +R N +S I + I V+ +K
Sbjct: 704 W--------GATSGASLAIEKCQTLHI-----CRKQRCN---LSDIVFNSRTIKDVNFLK 747
Query: 658 YLGVTLDRGMTFRPHIKTVR 717
LG+T D + F+ H +T+R
Sbjct: 748 ILGITFDPKLLFKQHCQTLR 767
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 71.3 bits (167), Expect = 2e-12
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Frame = +1
Query: 130 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVP 306
D+ AF+ ++ + N+GVPD + +I ++ +R Y E G RS Q++AGVP
Sbjct: 557 DVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--QVSAGVP 614
Query: 307 QGSALSPLLFSLYINDI-----PRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATL 471
QGS L P+L+++ + I PR E H FADD AI + + L +A+
Sbjct: 615 QGSVLGPILWNIMYDGILSISKPRGVELH--CFADDVAITAVAKTIPELQDISNVAITAA 672
Query: 472 GQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSK 651
+W K + I K+ VL L SR+ + + + G I
Sbjct: 673 IEWLEKVGLKIAAHKTEVVL--------------LSSRK--SVECMRVEVKGVEIASAET 716
Query: 652 VKYLGVTLDRGMTFRPHIKTVRXRAAFILGRL 747
+KYLGV +DR ++F+ H + +AA L
Sbjct: 717 LKYLGVLIDRRLSFKAHARYASKKAAMTAAAL 748
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 57.6 bits (133), Expect = 2e-08
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Frame = +1
Query: 103 QIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSR 279
Q GT F D AFD V + + +L ++G R + + + F S R R GT
Sbjct: 570 QYVLGT-FVDFKGAFDNVEWSAALSRLADLGC--REMGLWQSFFSGRRAVIRSSSGTVEV 626
Query: 280 PRQLTAGVPQGSALSPLLFSLYINDIPR--SPETHLALFADDTAIYYSCRKMSLLHRRLQ 453
P +T G PQGS P ++ + ++ + + P L+ +ADD + ++L +
Sbjct: 627 P--VTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGA 684
Query: 454 IAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQP 633
++ + W + ++ +K+ +L K RRA T + G+
Sbjct: 685 QLMSIVETWGAEVGDCLSTSKTVIMLLKGAL------------RRAPT-----VRFAGRN 727
Query: 634 IPWVSKVKYLGVTLDRGMTFRPHIKTVRXRAAFILGRLYPML 759
+P+V +YLG+T+ GM F HI ++R R ++G L +L
Sbjct: 728 LPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVL 769
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 56.0 bits (129), Expect = 6e-08
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = +1
Query: 97 RKQIPTGTLFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRS 276
+ ++ T + D ++AFD+V + +I +L +++ I++F+SNR RV S
Sbjct: 565 KSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTS 624
Query: 277 RPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL----FADD 399
P L G+PQGS +S +LF + N + H + +ADD
Sbjct: 625 SPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADD 669
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 55.6 bits (128), Expect = 8e-08
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 3/183 (1%)
Frame = +1
Query: 187 NMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS 366
N P LV IR + SNR R Q+T GVPQGS L PLL++ + I R
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLPCESSEGVFR-HQVTGGVPQGSVLGPLLWNTMYDGILRL 72
Query: 367 P---ETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFK 537
P + + FADD A+ + + + W +++ P K+ AVL
Sbjct: 73 PLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAVL-- 130
Query: 538 RGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVR 717
+ SR+A +A + + G + +KYL V +D ++FR H+
Sbjct: 131 ------------ISSRKAVETAT--VEVGGTLVSSSRAIKYLEVMIDTRLSFREHLAYAS 176
Query: 718 XRA 726
+A
Sbjct: 177 SKA 179
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +1
Query: 130 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 309
D++KAFD + H + L G P V +++ +G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 310 GSALSPLLFSLYINDIPRS-PE----------THLALFADDTAIYYSCR 423
G LSP+LF+L ++ + R+ P T+ A FADD ++ R
Sbjct: 542 GDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETR 590
>AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC,
isoform C protein.
Length = 1293
Score = 33.1 bits (72), Expect = 0.50
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 451 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 630
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 631 PIP 639
+P
Sbjct: 818 NVP 820
>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
isoform A protein.
Length = 2090
Score = 33.1 bits (72), Expect = 0.50
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 451 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQ 630
QIA++ W+RK R I+ +S AV + P ++P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 631 PIP 639
+P
Sbjct: 818 NVP 820
>BT022902-1|AAY55318.1| 571|Drosophila melanogaster IP12601p
protein.
Length = 571
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -3
Query: 459 CDLESPMKQRHLPTRVVDSRVIGEER*MGLR--RPGYIIDIQTK**RGERGALRDSGGQL 286
CD +SP R+ R V + V +GLR + I +Q + GE L D G
Sbjct: 327 CDDQSPQSDRYFNLRPVIADVKNNRVVVGLRFVKRNRIFHLQVQ--EGELLPLGDINGTT 384
Query: 285 TGTRTSSLYSISKRTVRQEVSY 220
+ YSIS + V + V Y
Sbjct: 385 LRWKPVDSYSISDKDVSENVDY 406
>BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p
protein.
Length = 579
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -3
Query: 459 CDLESPMKQRHLPTRVVDSRVIGEER*MGLR--RPGYIIDIQTK**RGERGALRDSGGQL 286
CD +SP R+ R V + V +GLR + I +Q + GE L D G
Sbjct: 335 CDDQSPQSDRYFNLRPVIADVKNNRVVVGLRFVKRNRIFHLQVQ--EGELLPLGDINGTT 392
Query: 285 TGTRTSSLYSISKRTVRQEVSY 220
+ YSIS + V + V Y
Sbjct: 393 LRWKPVDSYSISDKDVSENVDY 414
>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p protein.
Length = 1238
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 511 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 660
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 661 LGVTLDRG 684
G DRG
Sbjct: 1095 FGFG-DRG 1101
>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
protein.
Length = 1535
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Frame = +1
Query: 511 TKSAAVLFKRGRP-PNITSSIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 660
T SA +R +P P I S+I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 661 LGVTLDRG 684
G DRG
Sbjct: 1095 FGFG-DRG 1101
>AE014134-304|AAF51336.2| 482|Drosophila melanogaster CG31664-PA
protein.
Length = 482
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -3
Query: 459 CDLESPMKQRHLPTRVVDSRVIGEER*MGLR--RPGYIIDIQTK**RGERGALRDSGGQL 286
CD +SP R+ R V + V +GLR + I +Q + GE L D G
Sbjct: 238 CDDQSPQSDRYFNLRPVIADVKNNRVVVGLRFVKRNRIFHLQVQ--EGELLPLGDINGTT 295
Query: 285 TGTRTSSLYSISKRTVRQEVSY 220
+ YSIS + V + V Y
Sbjct: 296 LRWKPVDSYSISDKDVSENVDY 317
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12
protein.
Length = 1522
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 435 ASSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 557
+SS++P SS TV+P+VA + QP+E+R L + + H
Sbjct: 846 SSSSSP--SSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 884
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 438 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 557
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 64 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 103
>BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p
protein.
Length = 1125
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 592 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 714
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 592 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 714
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA,
isoform A protein.
Length = 1088
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 592 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 714
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB,
isoform B protein.
Length = 1125
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 592 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 714
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 438 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 557
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 859 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 898
>DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12
protein.
Length = 356
Score = 29.1 bits (62), Expect = 8.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 438 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQK 539
+S++ SS TV+P+VA + QP+E+R L +
Sbjct: 318 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSE 351
>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 507 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 686
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 687 DIPSPYKNGTR 719
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
protein.
Length = 1203
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +3
Query: 507 PHEKRSGALQKGSPSEHHFEHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 686
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 687 DIPSPYKNGTR 719
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,731,238
Number of Sequences: 53049
Number of extensions: 892601
Number of successful extensions: 2704
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2649
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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