Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40009
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70034-10|CAI79119.2|  560|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z70034-3|CAA93860.2|  620|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70034-2|CAA93854.3|  623|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U97009-1|AAC69030.2|  339|Caenorhabditis elegans Serpentine rece...    29   5.8  

>Z70034-10|CAI79119.2|  560|Caenorhabditis elegans Hypothetical
           protein C18E9.3c protein.
          Length = 560

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +3

Query: 9   DRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYN 161
           +++G  G + N++  N  Q N Q    SQN    GC P +    R  H  N
Sbjct: 480 NKSGKFGQNRNDMQKNNYQPNLQQPPMSQNPIPFGCPPRNVNAIREQHANN 530


>Z70034-3|CAA93860.2|  620|Caenorhabditis elegans Hypothetical
           protein C18E9.3b protein.
          Length = 620

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +3

Query: 9   DRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYN 161
           +++G  G + N++  N  Q N Q    SQN    GC P +    R  H  N
Sbjct: 540 NKSGKFGQNRNDMQKNNYQPNLQQPPMSQNPIPFGCPPRNVNAIREQHANN 590


>Z70034-2|CAA93854.3|  623|Caenorhabditis elegans Hypothetical
           protein C18E9.3a protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +3

Query: 9   DRNGNTGMSSNNLDGNQQQLNAQVNNPSQNVEIKGCFPSSTETSRLNHLYN 161
           +++G  G + N++  N  Q N Q    SQN    GC P +    R  H  N
Sbjct: 543 NKSGKFGQNRNDMQKNNYQPNLQQPPMSQNPIPFGCPPRNVNAIREQHANN 593


>U97009-1|AAC69030.2|  339|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 32 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 639 VLSCIGSQLSLYCLNRFCTSAGLWRCIPSYCFIVSITTHPRGVTL-SVFTVTSK 481
           +LS +   +SL  L RF TS     CI +Y   +S+    RG+ + S FT+ SK
Sbjct: 110 MLSMVFRCISLKTL-RFPTSGAFAMCILAYMIPLSMVVSIRGIEITSNFTINSK 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,584,414
Number of Sequences: 27780
Number of extensions: 453527
Number of successful extensions: 1183
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)