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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10401
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical pr...   196   1e-50
M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation fact...   196   1e-50
U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation fact...   108   4e-24
M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.       108   4e-24
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    38   0.010
Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U70852-8|ABB51182.1|  868|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical protein
            F25H5.4 protein.
          Length = 852

 Score =  196 bits (479), Expect = 1e-50
 Identities = 100/171 (58%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
 Frame = +2

Query: 254  IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
            IKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR  YA +L
Sbjct: 669  IKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVL 728

Query: 434  TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
            TA+PRL+EPVYL EIQCPE AVGGI  V        F +S      +  +    YL ++ 
Sbjct: 729  TAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVV--KAYLPVNE 786

Query: 611  SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
            S      +      +AFPQCVFDHWQVLPGDP E  +KP  +V +TRKRKG
Sbjct: 787  SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKG 837



 Score =  152 bits (368), Expect = 3e-37
 Identities = 65/86 (75%), Positives = 75/86 (87%)
 Frame = +3

Query: 3   CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
           CLSKSPNKHNRL   AQPMPDGL +DI+ G VN RD+FK RA+ L EKYEYDVTEARKIW
Sbjct: 585 CLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIW 644

Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
           CFGP+GTGPN+L+D +KGVQYLNE++
Sbjct: 645 CFGPDGTGPNLLMDVTKGVQYLNEIK 670



 Score =  104 bits (250), Expect = 6e-23
 Identities = 47/54 (87%), Positives = 49/54 (90%)
 Frame = +1

Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
           G  +GVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ  P
Sbjct: 751 GGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 804


>M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation factor
            protein.
          Length = 852

 Score =  196 bits (479), Expect = 1e-50
 Identities = 100/171 (58%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
 Frame = +2

Query: 254  IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
            IKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH DAIHRGGGQIIPT RR  YA +L
Sbjct: 669  IKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVL 728

Query: 434  TAQPRLMEPVYLCEIQCPEVAVGGI-TVC*TDVVVTFSKSPRWQVHLCSL*RPTYLSMSR 610
            TA+PRL+EPVYL EIQCPE AVGGI  V        F +S      +  +    YL ++ 
Sbjct: 729  TAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVV--KAYLPVNE 786

Query: 611  SVLLPICV-PTPADKAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKG 760
            S      +      +AFPQCVFDHWQVLPGDP E  +KP  +V +TRKRKG
Sbjct: 787  SFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKG 837



 Score =  146 bits (354), Expect = 2e-35
 Identities = 63/86 (73%), Positives = 74/86 (86%)
 Frame = +3

Query: 3   CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
           CLSKSPNKHNRL   AQPMPDGL +DI+ G V+ RD+FK RA+Y  EKYEY VTEARKIW
Sbjct: 585 CLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIW 644

Query: 183 CFGPEGTGPNILVDCSKGVQYLNELR 260
           CFGP+GTGPN+L+D +KGVQYLNE++
Sbjct: 645 CFGPDGTGPNLLMDVTKGVQYLNEIK 670



 Score =  104 bits (250), Expect = 6e-23
 Identities = 47/54 (87%), Positives = 49/54 (90%)
 Frame = +1

Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQGLP 660
           G  +GVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQ  P
Sbjct: 751 GGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFP 804


>U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation factor
            protein 1 protein.
          Length = 974

 Score =  108 bits (260), Expect = 4e-24
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
 Frame = +2

Query: 254  IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
            +++S+V GFQWA +EG + EE +R V+F + D  + T+ ++RGGGQ+IPT RRC Y+  L
Sbjct: 766  VRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFL 825

Query: 434  TAQPRLMEPVYLCEIQCPEVAVGGI-TVC--*TDVVVTFSKSPRWQVHLCSL*RPTYLSM 604
             A PRLMEP Y  E+  P   V  + TV       V T +  P   ++  S   P   S 
Sbjct: 826  MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 885

Query: 605  SRSVLLPICVPTPADKAFPQCVFDHWQVLPGDPCE 709
                 L I       +AF    F HWQ++PGDP +
Sbjct: 886  GFETDLRI---HTQGQAFCMSAFHHWQLVPGDPLD 917



 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 30/74 (40%), Positives = 45/74 (60%)
 Frame = +3

Query: 3   CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
           C +++PNK N++ M A+P+   L EDI+   V    + +    +   KY +D+  AR IW
Sbjct: 678 CFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIW 737

Query: 183 CFGPEGTGPNILVD 224
            FGP+ TGPNIL+D
Sbjct: 738 AFGPDTTGPNILLD 751


>M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.
          Length = 849

 Score =  108 bits (260), Expect = 4e-24
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
 Frame = +2

Query: 254  IKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLL 433
            +++S+V GFQWA +EG + EE +R V+F + D  + T+ ++RGGGQ+IPT RRC Y+  L
Sbjct: 641  VRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFL 700

Query: 434  TAQPRLMEPVYLCEIQCPEVAVGGI-TVC--*TDVVVTFSKSPRWQVHLCSL*RPTYLSM 604
             A PRLMEP Y  E+  P   V  + TV       V T +  P   ++  S   P   S 
Sbjct: 701  MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 760

Query: 605  SRSVLLPICVPTPADKAFPQCVFDHWQVLPGDPCE 709
                 L I       +AF    F HWQ++PGDP +
Sbjct: 761  GFETDLRI---HTQGQAFCMSAFHHWQLVPGDPLD 792



 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 29/74 (39%), Positives = 44/74 (59%)
 Frame = +3

Query: 3   CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIW 182
           C +++PNK N++ M A+P+   L EDI+   V    + +    +   KY +D+  AR IW
Sbjct: 553 CFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIW 612

Query: 183 CFGPEGTGPNILVD 224
            FG + TGPNIL+D
Sbjct: 613 AFGLDTTGPNILLD 626


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = +1

Query: 499 GWYHGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 648
           G  H VL++R+  V  E     T +F V + +PV ESF F   LR  T G
Sbjct: 771 GKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSG 820


>Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical
           protein F29C12.4 protein.
          Length = 750

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 517 LNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQG 654
           L +R   +       G    I +A  P+++ FG+T++LRS T G+G
Sbjct: 665 LTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEGKG 708


>U70852-8|ABB51182.1|  868|Caenorhabditis elegans Hypothetical
           protein F45E4.7a protein.
          Length = 868

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +3

Query: 42  MKAQPMPDGLPEDIDEGRVNP---RDDFKTRARYLTEKYEYDVTEARKI 179
           ++  P P   PE     R NP   RDD +       ++ E+ VTE R I
Sbjct: 87  IQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQEIEFPVTEERSI 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,195,723
Number of Sequences: 27780
Number of extensions: 488533
Number of successful extensions: 1418
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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