Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00030
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass...    28   4.6  
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass...    28   4.6  

>Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical
           protein F29D10.2 protein.
          Length = 149

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 75  CCCRPKCCCTCCRTCCCTRCCTCCRPC 101


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 77  CCCRPKCCCTCCRTCCCTRCCTCCRPC 103


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 80  CCCRPKCCCTCCRTCCCTRCCTCCRPC 106


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 95  CCCRR--CCTCCRTCCCTRCCTCCRPC 119


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 93  CCCRR--CCTCCRTCCCTRCCTCCRPC 117


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 94  CCCRR--CCTCCRTCCCTRCCTCCRPC 118


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 94  CCCRR--CCTCCRTCCCTRCCTCCRPC 118


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 108 CCYRNSACCSRCRSFGCHXCCPSVNLC 28
           CC R   CC+ CR+  C  CC     C
Sbjct: 95  CCCRR--CCTCCRTCCCTRCCTCCRPC 119


>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 279, isoform a protein.
          Length = 1020

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 517  LYNLI-WYTPA*IIISKYCFCFGCGIKNTFYK 609
            ++N++ WYT   + +  Y FC  C + N + K
Sbjct: 964  IFNIVRWYTTEDLSVDSYPFCSHCHVANEYKK 995


>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 279, isoform b protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 517  LYNLI-WYTPA*IIISKYCFCFGCGIKNTFYK 609
            ++N++ WYT   + +  Y FC  C + N + K
Sbjct: 1005 IFNIVRWYTTEDLSVDSYPFCSHCHVANEYKK 1036


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,506,252
Number of Sequences: 27780
Number of extensions: 186082
Number of successful extensions: 505
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)