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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00029
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical pr...    31   0.58 
Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical pr...    31   0.58 
U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical ...    29   4.1  
AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical ...    29   4.1  
AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.    29   4.1  
AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.    29   4.1  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    28   5.4  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    28   5.4  
Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 555 FKLQHHTSTLSSILLYNNQRLNSYQDITGLMEDRHYL 445
           FK+ ++   L+SIL+Y+ +R  SY +I     D H L
Sbjct: 843 FKISYNVQELASILVYSKKRFVSYSEIYLPQSDMHLL 879


>Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 555 FKLQHHTSTLSSILLYNNQRLNSYQDITGLMEDRHYL 445
           FK+ ++   L+SIL+Y+ +R  SY +I     D H L
Sbjct: 843 FKISYNVQELASILVYSKKRFVSYSEIYLPQSDMHLL 879


>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +3

Query: 249 W*DCEEPSDDTGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMR--QKINQRRTND 422
           W D      + G  + A    + ++ I  +VCG V +   + LI + +  +    R+ ND
Sbjct: 239 WGDWRTSPAEMGIDNSADPRFIGMWWIGFVVCGFVALFTAFPLIMFPKRLKDTTVRKAND 298

Query: 423 VMYEDVMIGND 455
           V   D  +  D
Sbjct: 299 VHRTDASLDKD 309


>AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical
           protein H30A04.1b protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 279 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 395
           + G   + AA   I  IALIV GL+L+     ++ Y+RQ
Sbjct: 737 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 775


>AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical
           protein H30A04.1a protein.
          Length = 808

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 279 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 395
           + G   + AA   I  IALIV GL+L+     ++ Y+RQ
Sbjct: 735 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 773


>AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 279 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 395
           + G   + AA   I  IALIV GL+L+     ++ Y+RQ
Sbjct: 737 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 775


>AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.
          Length = 808

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 279 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 395
           + G   + AA   I  IALIV GL+L+     ++ Y+RQ
Sbjct: 735 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 773


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
           protein K08C7.3b protein.
          Length = 3672

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 154 CNVTAMEPXKGKNEVCVQKTLQCVCEKGF 240
           C     +P   +  VC Q T QC+C++GF
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF 589


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
           protein K08C7.3a protein.
          Length = 3704

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 154 CNVTAMEPXKGKNEVCVQKTLQCVCEKGF 240
           C     +P   +  VC Q T QC+C++GF
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF 589


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
           chain protein.
          Length = 3704

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 154 CNVTAMEPXKGKNEVCVQKTLQCVCEKGF 240
           C     +P   +  VC Q T QC+C++GF
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF 589


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
           protein.
          Length = 3704

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 154 CNVTAMEPXKGKNEVCVQKTLQCVCEKGF 240
           C     +P   +  VC Q T QC+C++GF
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF 589


>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 LHSLTNSNKTFFADTLQCLLDANLIF 187
           L ++ +S  TFF DTLQ L +AN ++
Sbjct: 188 LPAVFDSRITFFVDTLQTLFNANSVY 213


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
            protein F48E3.8a protein.
          Length = 2427

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 184  GKNEVCVQKTLQCVCEKGFIRVGET 258
            G N+VC+Q   QC C  G++ + ET
Sbjct: 1579 GMNQVCIQD--QCQCRSGYLVLQET 1601


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,947,961
Number of Sequences: 27780
Number of extensions: 267225
Number of successful extensions: 658
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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