Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00015
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical pr...    78   5e-15
AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical ...    75   5e-14
AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione ...    71   8e-13
U41533-3|AAA83164.1|  206|Caenorhabditis elegans Glutathione s-t...    28   4.1  
Z80217-6|CAB02292.1|  227|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AF025461-7|AAB70997.2|  330|Caenorhabditis elegans Seven tm rece...    27   9.4  
AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione S...    27   9.4  

>Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical
           protein D1053.1 protein.
          Length = 214

 Score = 77.8 bits (183), Expect = 5e-15
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
 Frame = +2

Query: 254 LEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVLIYVGEETK---KEWSQHWV 424
           LEET P  PL+P+D  KRA  R I  ++ASGIQPL NL VL  + ++      ++++ +V
Sbjct: 76  LEETHPDVPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKKEAGFGGQFAKQFV 135

Query: 425 TRGFRAIEKLLSTTAGKYCVGDEITLAD 508
             G  A+E LL   +GKY VGD++T+AD
Sbjct: 136 VEGLTALEILLKQHSGKYAVGDDVTIAD 163



 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +3

Query: 63  SCSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLN 242
           SCSWRVRIAL LK + Y+ K V L+    E+  ++   +NP  +VP+  +DG  + ESL 
Sbjct: 15  SCSWRVRIALALKNVDYEYKTVDLL---SEEAKSKLKEINPAAKVPTFVVDGQVITESLA 71

Query: 243 IMHY 254
           I+ Y
Sbjct: 72  IIEY 75



 Score = 27.9 bits (59), Expect = 5.4
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +1

Query: 22 VENKQPVLYSYWRT 63
          + N++PVLYSYWR+
Sbjct: 1  MSNQKPVLYSYWRS 14


>AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical
           protein Y53G8B.1 protein.
          Length = 213

 Score = 74.5 bits (175), Expect = 5e-14
 Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = +2

Query: 254 LEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVLIYVGEETKKE---WSQHWV 424
           L+E  P  PL+P++   +A+ R I   IAS IQPLQN  + + + E+       W QH++
Sbjct: 75  LDEIYPDPPLLPKEPELKARARAIAFHIASNIQPLQNKPIYLMLNEKEPGYGDFWCQHFI 134

Query: 425 TRGFRAIEKLLSTTAGKYCVGDEITLAD 508
           ++GF+A+E+LL   +G +CVG++I++AD
Sbjct: 135 SKGFKALEELLQMHSGDFCVGNQISIAD 162



 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = +3

Query: 66  CSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLNI 245
           CS RVR AL LK+I Y+ + V+L+    EQ   E+   NP E+VP L I+G TL ES+ I
Sbjct: 15  CSSRVRTALALKKIDYEYQPVNLLNKQKEQ---EFHGNNPAEKVPILKINGLTLTESMAI 71

Query: 246 MHY 254
           + Y
Sbjct: 72  IEY 74


>AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione
           s-transferase protein43 protein.
          Length = 214

 Score = 70.5 bits (165), Expect = 8e-13
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
 Frame = +2

Query: 254 LEETRPQRPLMPQDCFKRAKVREICEMIASGIQPLQNLIVLIYVGEETKKE---WSQHWV 424
           L+E  P  P +P++  KR+  R I   I + IQPLQ + +   + E+       W  H+V
Sbjct: 76  LDEAYPDPPFLPKELDKRSYSRAIALHIVASIQPLQAINIHKMLNEKEPGYGDFWCNHFV 135

Query: 425 TRGFRAIEKLLSTTAGKYCVGDEITLAD 508
            +GF A+E+LL   +GKYCVGD++T+AD
Sbjct: 136 NKGFLALEELLKKHSGKYCVGDQLTIAD 163



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +3

Query: 63  SCSWRVRIALNLKEIPYDIKAVSLIKGGGEQHCNEYXAVNPMEQVPSLCIDGHTLIESLN 242
           SC+WRVRIAL LK I Y+ + + L     + +  E+   NP ++VP+L I+G +L ESL 
Sbjct: 13  SCAWRVRIALALKNIDYEYRPIDLFSEESKNNA-EFVKHNPAKKVPTLVINGLSLTESLA 71

Query: 243 IMHY 254
           I+ Y
Sbjct: 72  IIEY 75


>U41533-3|AAA83164.1|  206|Caenorhabditis elegans Glutathione
           s-transferase protein 9 protein.
          Length = 206

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 165 EYXAVNPMEQVPSLCIDGHTLIESLNIMHY*RRQ 266
           E   + P  QVP L +DG  L +S+ I+ Y  +Q
Sbjct: 41  EIKNMTPFGQVPVLEVDGRQLAQSITIVRYLSKQ 74


>Z80217-6|CAB02292.1|  227|Caenorhabditis elegans Hypothetical
           protein F37B1.6 protein.
          Length = 227

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 434 FRAIEKLLSTTAGKYCVGDEITLADAA*FHKCSMLEDFML 553
           F  +  +L      Y VGD+ITLAD A       L+++ L
Sbjct: 154 FEILNGILERNKSGYLVGDDITLADLAISENVDSLKNYGL 193


>Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical
           protein K08F4.11 protein.
          Length = 207

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 150 EQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMHY*RRQ 266
           E+  ++     P  QVP LCIDG    +S  I  Y  R+
Sbjct: 36  EEKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARK 74


>AF025461-7|AAB70997.2|  330|Caenorhabditis elegans Seven tm
           receptor protein 148 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 200 WYLLHRVDCXILIAVLFSASLNQADSLY 117
           W ++  V+C  +IAV FS  L  A ++Y
Sbjct: 195 WEIMSSVECVCIIAVCFSTILFCASNIY 222


>AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 207

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 150 EQHCNEYXAVNPMEQVPSLCIDGHTLIESLNIMHY*RRQ 266
           E+  ++     P  QVP LCIDG    +S  I  Y  R+
Sbjct: 36  EEKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARK 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,142,456
Number of Sequences: 27780
Number of extensions: 266268
Number of successful extensions: 538
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)