Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00014
         (589 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical pr...    32   0.35 
U58732-5|AAW88398.1|  337|Caenorhabditis elegans Serpentine rece...    29   2.4  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U58732-6|AAB00596.3|  333|Caenorhabditis elegans Serpentine rece...    28   4.3  
AL022716-2|CAA18772.1|  373|Caenorhabditis elegans Hypothetical ...    28   4.3  
AL022716-1|CAA18770.1|  371|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z46343-7|CAE17971.2|  187|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U39850-1|AAA81055.3|  618|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical...    27   9.9  

>Z81585-4|CAB04687.1|  345|Caenorhabditis elegans Hypothetical
           protein T05E12.4 protein.
          Length = 345

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +3

Query: 420 YSTIVWLDSTVKRIPAVMYSCIKNSIRIMHLVRVSLFCCFLFV 548
           YS  V+LDS    +P  + + + NS+ ++ L+R  L CC +F+
Sbjct: 2   YSLWVYLDSAA--LPLQIIALLVNSLHLLVLIRKPLRCCGIFI 42


>U58732-5|AAW88398.1|  337|Caenorhabditis elegans Serpentine
           receptor, class v protein5, isoform b protein.
          Length = 337

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = -3

Query: 326 YLEETTILKVIHEVLVDGYYYYMFIVITILYLTTFMQFLTF---ISLHSNMSITL-VPK 162
           + E  T    I   +V G++YY+ IV+ I YLT  +  LT    IS +++++I++  PK
Sbjct: 72  FFEPDTEFHGIIPRIVSGFHYYIKIVVYIGYLTFALNRLTSALNISSYNSVNISIWTPK 130


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
 Frame = +1

Query: 82  FCWHFYNNKFVTKKPYIKFTSCFI--DAHFGTRV-IDILECRLINVKNC--MNVVKYNIV 246
           F +HF N++    K   +FT C I  DA FGT   +D L+    ++  C  ++ V +N V
Sbjct: 110 FSFHFMNSQTSIHKYLPRFTLCIILKDAVFGTSFWLDELKYLNDDIFECFIISFVFFNFV 169

Query: 247 ITI 255
           I++
Sbjct: 170 ISV 172


>U58732-6|AAB00596.3|  333|Caenorhabditis elegans Serpentine
           receptor, class v protein5, isoform a protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 326 YLEETTILKVIHEVLVDGYYYYMFIVITILYLTTFMQFLTFISLHSNMSITLVPK 162
           + E  T    I   +V G++YY+ IV+ I YLT  +  LT     S+ +    PK
Sbjct: 72  FFEPDTEFHGIIPRIVSGFHYYIKIVVYIGYLTFALNRLTSALNISSYNSIWTPK 126


>AL022716-2|CAA18772.1|  373|Caenorhabditis elegans Hypothetical
           protein C24F3.1b protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/82 (17%), Positives = 39/82 (47%)
 Frame = -3

Query: 437 PDNSAVSSFEINLYDCYQDNILMNEYFPFSIQCNSTNYLEETTILKVIHEVLVDGYYYYM 258
           P    V S    LY  +Q +  ++++  F +Q    + + + ++  ++H   +   Y++ 
Sbjct: 166 PTEHRVMSAAYKLYFIFQISYWIHQFPEFYLQKLKRDEIRQKSVQAILHIAFISIAYFFN 225

Query: 257 FIVITILYLTTFMQFLTFISLH 192
           F  + +  +T  ++++T +  H
Sbjct: 226 FTRVGLALIT--LEYITQLIFH 245


>AL022716-1|CAA18770.1|  371|Caenorhabditis elegans Hypothetical
           protein C24F3.1a protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/82 (17%), Positives = 39/82 (47%)
 Frame = -3

Query: 437 PDNSAVSSFEINLYDCYQDNILMNEYFPFSIQCNSTNYLEETTILKVIHEVLVDGYYYYM 258
           P    V S    LY  +Q +  ++++  F +Q    + + + ++  ++H   +   Y++ 
Sbjct: 164 PTEHRVMSAAYKLYFIFQISYWIHQFPEFYLQKLKRDEIRQKSVQAILHIAFISIAYFFN 223

Query: 257 FIVITILYLTTFMQFLTFISLH 192
           F  + +  +T  ++++T +  H
Sbjct: 224 FTRVGLALIT--LEYITQLIFH 243


>Z46343-7|CAE17971.2|  187|Caenorhabditis elegans Hypothetical
           protein T23F11.6 protein.
          Length = 187

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -3

Query: 467 GGNAFNSTVKPDNSAVSSFEINLYDCYQDNILMNEYFPFSIQCNSTNYLEETTILKVIHE 288
           GG A  S  K  N   S + + +  C  DN+L      F   C+   Y  E++I +++ E
Sbjct: 63  GGRALASKTKYVNEEESEYSLKMEQCCVDNLLPERCMGF---CSFETY-NESSIFRLLAE 118


>U39850-1|AAA81055.3|  618|Caenorhabditis elegans Hypothetical
           protein F52C9.5 protein.
          Length = 618

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 5   NM*TDFLGRQTEIRTDVSSSSFRNPPFVGTSTITSSSLKN 124
           N+  D   +Q     D    +F  PP +GT+T ++ SL N
Sbjct: 25  NLVEDITDKQDSSEDDDHLQTFPTPPPIGTTTASADSLFN 64


>AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical
           protein Y53F4B.24 protein.
          Length = 866

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -3

Query: 431 NSAVSSFEINLYDCYQDNILMNEYFPFSIQCNSTNYLEETTILKVIHE 288
           N  + SFEI       +NIL+ +     I+    N LEE   L  I+E
Sbjct: 604 NRNLKSFEIRT----NENILLEQVLDLPIEATDENELEERRTLSTIYE 647


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,312,250
Number of Sequences: 27780
Number of extensions: 284193
Number of successful extensions: 910
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)