SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A07f
         (412 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   162   1e-40
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   162   1e-40
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       162   1e-40
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       162   1e-40
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       162   1e-40
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   162   1e-40
J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein ( C.ele...   162   1e-40
J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein ( C.ele...   162   1e-40
Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   161   2e-40
J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein ( C.ele...   161   2e-40
J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein ( C.ele...   161   2e-40
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       159   7e-40
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   155   9e-39
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   123   4e-29
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...    79   9e-16
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...    71   2e-13
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...    60   8e-10
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...    48   4e-06
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...    33   0.061
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    32   0.14 
U41278-7|AAT81193.1|  680|Caenorhabditis elegans Hypothetical pr...    30   0.75 
U41278-6|AAK31510.3|  771|Caenorhabditis elegans Hypothetical pr...    30   0.75 
AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical ...    28   3.0  
Z73906-10|CAB54209.1|  530|Caenorhabditis elegans Hypothetical p...    27   4.0  
Z73906-9|CAA98121.1|  571|Caenorhabditis elegans Hypothetical pr...    27   4.0  
Z49968-1|CAA90258.2|  499|Caenorhabditis elegans Hypothetical pr...    27   4.0  
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase...    27   4.0  
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase...    27   4.0  
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de...    27   4.0  
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de...    27   4.0  
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    26   9.2  
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    26   9.2  
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical...    26   9.2  
AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily a...    26   9.2  

>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene III, 5' end. ).
          Length = 86

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 29.1 bits (62), Expect = 1.3
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKI 360
           P    IVTNWDDMEKI
Sbjct: 71  PIEHGIVTNWDDMEKI 86


>J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene I, 5' end. ).
          Length = 86

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 29.1 bits (62), Expect = 1.3
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKI 360
           P    IVTNWDDMEKI
Sbjct: 71  PIEHGIVTNWDDMEKI 86


>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  161 bits (390), Expect = 2e-40
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene IV, 5' end. ).
          Length = 86

 Score =  161 bits (390), Expect = 2e-40
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 29.1 bits (62), Expect = 1.3
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKI 360
           P    IVTNWDDMEKI
Sbjct: 71  PIEHGIVTNWDDMEKI 86


>J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene II, 5' end. ).
          Length = 83

 Score =  161 bits (390), Expect = 2e-40
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  159 bits (386), Expect = 7e-40
 Identities = 71/75 (94%), Positives = 75/75 (100%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 281
           MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 282 SKRGILTLKYPIEHG 326
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  155 bits (377), Expect = 9e-39
 Identities = 71/73 (97%), Positives = 73/73 (100%)
 Frame = +3

Query: 108 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 287
           +EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 288 RGILTLKYPIEHG 326
           RGILTLKYPIEHG
Sbjct: 62  RGILTLKYPIEHG 74



 Score = 70.9 bits (166), Expect = 3e-13
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 70  PIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  123 bits (297), Expect = 4e-29
 Identities = 56/57 (98%), Positives = 57/57 (100%)
 Frame = +3

Query: 156 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 326
           +AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 5   RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 61



 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 57  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score = 79.4 bits (187), Expect = 9e-16
 Identities = 32/67 (47%), Positives = 49/67 (73%)
 Frame = +3

Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 305
           +V+DNGSG+ KAGFAG+  P+  F + VGRP++  VM G    D ++G +A+S RG+ ++
Sbjct: 11  VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70

Query: 306 KYPIEHG 326
           +YP+EHG
Sbjct: 71  EYPMEHG 77



 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTF-YNELRVAPEEHP 411
           P    IV NW DMEKIW + F  ++L++ PEEHP
Sbjct: 73  PMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHP 106


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           P    IVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 27  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 59



 Score = 69.3 bits (162), Expect = 1e-12
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 234 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 326
           MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 1   MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 31


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score = 59.7 bits (138), Expect = 8e-10
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = +3

Query: 126 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 299
           +VVDNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VG+E    R +L
Sbjct: 9   IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68

Query: 300 TLKYPIEHG 326
            + YP+++G
Sbjct: 69  DINYPMDNG 77



 Score = 38.3 bits (85), Expect = 0.002
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 307 NTPSNTEIVTNWDDMEKIWHHTFYNE-LRVAPEE 405
           N P +  IV NWDDM  +W HTF  E L + P+E
Sbjct: 71  NYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
 Frame = +3

Query: 102 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 245
           M   ++ A V+DNG+G  K G+AG+  P+ + PS       V     Q       V  G+
Sbjct: 1   MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60

Query: 246 GQKDSYVGDEAQSKRGI-LTLKYPIEHG 326
              D ++GDEA S      T+KYPI HG
Sbjct: 61  DDLDFFIGDEALSPAATNYTVKYPIRHG 88



 Score = 33.9 bits (74), Expect = 0.046
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTFYNELRVAPEEH 408
           P    IV +WD ME+ W    +  LR  PE+H
Sbjct: 84  PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score = 33.5 bits (73), Expect = 0.061
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 111 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 209
           +EV+ LV D GS   + GFAG++ P+   PS +
Sbjct: 9   DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41



 Score = 29.5 bits (63), Expect = 0.99
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 328 IVTNWDDMEKIWHHTFYNELRVAPEEHP 411
           ++ +W+  EKI  H++ N L   P EHP
Sbjct: 98  LIEDWELFEKIVEHSYENILYSNPSEHP 125


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -1

Query: 292 PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAAT 116
           PL++ +SS    S     TITP  +G+PT   N      S+P  P   +    STT A +
Sbjct: 464 PLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATS 523

Query: 115 SSS 107
           ++S
Sbjct: 524 TAS 526


>U41278-7|AAT81193.1|  680|Caenorhabditis elegans Hypothetical
           protein F33G12.6b protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 0.75
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 288 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 133
           FC +    H++    + P R D      +RG  +++H    RNRPC     C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445


>U41278-6|AAK31510.3|  771|Caenorhabditis elegans Hypothetical
           protein F33G12.6a protein.
          Length = 771

 Score = 29.9 bits (64), Expect = 0.75
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = -2

Query: 288 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 133
           FC +    H++    + P R D      +RG  +++H    RNRPC     C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445


>AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical
           protein C08F1.11 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 156 KAGFAGDDAPRAVFPSIVGRPRHQG 230
           KA + G D P+A F  I+G   ++G
Sbjct: 44  KASYLGHDTPQATFREIIGNKEYRG 68


>Z73906-10|CAB54209.1|  530|Caenorhabditis elegans Hypothetical
           protein D2030.9b protein.
          Length = 530

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 313 PSNTEIVTN-WDDMEKIWHHTFYNELRVAPEEHP 411
           P+  EIV++ WD +  +W      E  +AP +HP
Sbjct: 453 PTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486


>Z73906-9|CAA98121.1|  571|Caenorhabditis elegans Hypothetical
           protein D2030.9a protein.
          Length = 571

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 313 PSNTEIVTN-WDDMEKIWHHTFYNELRVAPEEHP 411
           P+  EIV++ WD +  +W      E  +AP +HP
Sbjct: 494 PTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527


>Z49968-1|CAA90258.2|  499|Caenorhabditis elegans Hypothetical
           protein M110.1 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 206 RGKAPPSGRDGRYGTEG 256
           RGKA  +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232


>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
           beta protein.
          Length = 1418

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 181 ASSPAKPALHIPEPLSTTNAATSS 110
           +SSPA P++  P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675


>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
           beta homolog EGL-8 protein.
          Length = 1431

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 181 ASSPAKPALHIPEPLSTTNAATSS 110
           +SSPA P++  P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676


>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
           defective protein 8,isoform a protein.
          Length = 1419

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 181 ASSPAKPALHIPEPLSTTNAATSS 110
           +SSPA P++  P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676


>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
           defective protein 8,isoform b protein.
          Length = 1431

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 181 ASSPAKPALHIPEPLSTTNAATSS 110
           +SSPA P++  P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTF 375
           P     V NWD  ++IW  TF
Sbjct: 62  PIERGYVVNWDTQQQIWEKTF 82


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 313 PSNTEIVTNWDDMEKIWHHTF 375
           P     V NWD  ++IW  TF
Sbjct: 62  PIERGYVVNWDTQQQIWEKTF 82


>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
           protein Y105C5B.2 protein.
          Length = 1044

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 300 SGYLFCSVP---HLLHKSPSVPYRPSRPDGGAF 211
           SG +F  +P   HLL    + P  P  P+G +F
Sbjct: 694 SGEIFLKLPELAHLLSSQSTAPLHPKVPEGNSF 726


>AF043699-3|AAB97566.1| 1220|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 203 protein.
          Length = 1220

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +3

Query: 171 GDDAPRAVFPS--IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGNRH 335
           G    R + P   +VG PR + +M+G  ++   V    +     LT+  P+E    H
Sbjct: 109 GKTGCRRIVPGHFLVGDPRGRALMIGAVERQKLVYIMNRDSEAHLTISSPLEAHKHH 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,914,897
Number of Sequences: 27780
Number of extensions: 252740
Number of successful extensions: 896
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -