Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30019
         (523 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U53155-10|AAC48271.1|  346|Caenorhabditis elegans Seven tm recep...    28   3.5  
U21308-6|AAN60508.1|  284|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z72505-3|CAA96610.1|  340|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U40423-4|AAA81453.2|  243|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical
           protein R07E3.5b protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +3

Query: 36  FTSSACLEWLS*AHAATFTVT*SFHFVNSSCSGAGICTSRFTDPL--TVVSSSHCYVCV 206
           F +  C+      ++  F+    FH   +  +  GIC +  T P+   V+S  +CY  +
Sbjct: 147 FLNRRCMLMCMRIYSRAFSSVIRFHDKENRANKGGICVANHTSPIDVMVLSCDNCYAMI 205


>Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical
           protein R07E3.5a protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +3

Query: 36  FTSSACLEWLS*AHAATFTVT*SFHFVNSSCSGAGICTSRFTDPL--TVVSSSHCYVCV 206
           F +  C+      ++  F+    FH   +  +  GIC +  T P+   V+S  +CY  +
Sbjct: 204 FLNRRCMLMCMRIYSRAFSSVIRFHDKENRANKGGICVANHTSPIDVMVLSCDNCYAMI 262


>U53155-10|AAC48271.1|  346|Caenorhabditis elegans Seven tm receptor
           protein 139 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
 Frame = +2

Query: 17  YEEISCVHLVCLFRVAF-----VSARRHFYRYLVISFCE-QFLFRRRYLHLTF 157
           YE+++   ++CLF  A+     + A + FYRY+V+  C  QFL   +   L F
Sbjct: 81  YEDLAGTFIICLFCAAYSLMTALLATQFFYRYIVV--CRPQFLHHIKGYKLCF 131


>U21308-6|AAN60508.1|  284|Caenorhabditis elegans Hypothetical
           protein ZK1290.13 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 32  CVHLVCLFRVAFVSARRHFYRYL 100
           CV L+CL  +AF+ ARR +++ L
Sbjct: 166 CVILICLKMLAFIVARRTYFQVL 188


>Z72505-3|CAA96610.1|  340|Caenorhabditis elegans Hypothetical
           protein C50C10.4 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 17  YEEISCVHLVCLFRVAFVSARRHFYRY---LVISFCEQFLF 130
           Y  + C  ++CL R+  + + RH  RY   ++  F   FLF
Sbjct: 124 YGVLICPFMICLMRLTIMMSPRHHERYCQLIMYRFAIPFLF 164


>U40423-4|AAA81453.2|  243|Caenorhabditis elegans Hypothetical
           protein C24H10.1 protein.
          Length = 243

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/49 (26%), Positives = 17/49 (34%)
 Frame = -3

Query: 350 MVPSWQYLVYXXXXXXXXXXXXXVCFKPDYHFSLRNNTPLRENHCSYKY 204
           M PSWQ +                C +P  H     N      HC+YK+
Sbjct: 33  MSPSWQVVDIREFRATHHHGLWLDCTRPQLHLVKSQNKDDLPLHCTYKF 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,553,686
Number of Sequences: 27780
Number of extensions: 226103
Number of successful extensions: 412
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)