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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30003
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    54   1e-07
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    54   1e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    41   8e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    41   8e-04
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    33   0.27 
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    33   0.27 
U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical p...    32   0.35 
AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical ...    31   0.61 
U50309-4|AAG24133.1|  267|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70309-3|CAA94357.2|  358|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti...    29   4.3  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 576 LRNCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERREL 692
           L  C+++ +CTE  M+ FP RM DWLF +M+++ +RREL
Sbjct: 132 LGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170



 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +2

Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQ 508
           PC    C  G+ C + + G+  C CI  CP  + D    VC N N+T+ S C++YR+
Sbjct: 52  PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRE 108


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 576 LRNCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERREL 692
           L  C+++ +CTE  M+ FP RM DWLF +M+++ +RREL
Sbjct: 132 LGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170



 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +2

Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQ 508
           PC    C  G+ C + + G+  C CI  CP  + D    VC N N+T+ S C++YR+
Sbjct: 52  PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRE 108


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQDAYAST 526
           K  C     C + E+  A C C  DCP YE +  + VC     T+ S+C + +   + S 
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574

Query: 527 TLISA 541
            +++A
Sbjct: 575 FVMTA 579



 Score = 35.9 bits (79), Expect = 0.029
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 508
           PC K+ C     C +     A C C   C    D  R VC    ET+ ++CE+ ++
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKK 421



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +2

Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
           PC    C  G+ C++       C C + C   T +   VC    +T+ ++C
Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 342


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQDAYAST 526
           K  C     C + E+  A C C  DCP YE +  + VC     T+ S+C + +   + S 
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582

Query: 527 TLISA 541
            +++A
Sbjct: 583 FVMTA 587



 Score = 35.9 bits (79), Expect = 0.029
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 508
           PC K+ C     C +     A C C   C    D  R VC    ET+ ++CE+ ++
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKK 429



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +2

Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
           PC    C  G+ C++       C C + C   T +   VC    +T+ ++C
Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 350


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +3

Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 449
           T+ ST S    +++  +T+ + A  ST++   + +S++T T      T S ++PT  TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368

Query: 450 AWCAQTSTKPGNRIAKY 500
              +  S+ P N I  Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = +3

Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 449
           T+ ST S    +++  +T+ + A  ST++   + +S++T T      T S ++PT  TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368

Query: 450 AWCAQTSTKPGNRIAKY 500
              +  S+ P N I  Y
Sbjct: 369 I-TSTLSSLPDNAICSY 384


>U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical
           protein B0507.1 protein.
          Length = 615

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 18/70 (25%), Positives = 24/70 (34%)
 Frame = +2

Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYASTTLIS 538
           CS G  C     G+ MC C  D  Y   S    C       +  C+   + + A +   S
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCKTDMECSAAFSECSS 274

Query: 539 AVVRNTTTFK 568
              R    FK
Sbjct: 275 GGCRCKRGFK 284


>AC024785-3|AAF60597.2|  456|Caenorhabditis elegans Hypothetical
           protein Y46C8AL.2 protein.
          Length = 456

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 22/67 (32%), Positives = 29/67 (43%)
 Frame = +3

Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
           TT +T + MK   T  +T  T+  KST     + KST T     T  ++ PT  T     
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318

Query: 459 AQTSTKP 479
             T T P
Sbjct: 319 KSTPTTP 325



 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +3

Query: 285 FSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQ 464
           ++T+     MK+  +T  T+  KST     + KST T     T  ++ PT  T       
Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206

Query: 465 TSTKP 479
           T T P
Sbjct: 207 TPTTP 211



 Score = 28.7 bits (61), Expect = 4.3
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +3

Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
           TT +T + MK   T  +T K+    +T     + KST T     T  ++ PT  T     
Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331

Query: 459 AQTSTKP 479
             T T P
Sbjct: 332 KSTPTTP 338



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +3

Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT 443
           TT +T + MK   T  +T  T+  KST     + KST T     T  ++ PT  T
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427


>U50309-4|AAG24133.1|  267|Caenorhabditis elegans Hypothetical
           protein F58G4.4 protein.
          Length = 267

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +2

Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTN--FNETWQSDCEVYRQDA 514
           P  + +C++G  C  +E     C     C ++    + VC +    E  + D  V+   A
Sbjct: 138 PKCQYYCTSGEKCSRDECPKRKCQNNSQCQFDGSESKCVCQSGYIGEFCEIDQTVFNHPA 197

Query: 515 YASTTLISAVV 547
            ++  L+ ++V
Sbjct: 198 DSAVVLMCSIV 208


>Z70309-3|CAA94357.2|  358|Caenorhabditis elegans Hypothetical
           protein R102.3 protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -2

Query: 612 FQCSQAFLGSSVILDLNVVVLRTTALIRVVEA*ASWRYTSQSDCQVSL 469
           FQ  +A L  + ILD +  +L+T  +  + E    WR TS S  +VSL
Sbjct: 87  FQRDEAMLLKNRILDASDEILKTNFMWNMFERSKKWRNTSHSS-EVSL 133


>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
           protein protein 6 protein.
          Length = 1106

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +3

Query: 174 EQLGRGDISEAEHIEHGMSESLDEKRYMRQK*PELTTFSTRSLMKRMKT-KKSTWKTLA* 350
           E++ + D  E    + G  E+ ++K  + +K P+   F  +S      T KKS  K    
Sbjct: 171 EEIAKED-DEGIDEDDGDEETPEQKTTIPKKKPK-NAFGGKSKKNNWGTRKKSKAKVSQV 228

Query: 351 KSTAAQDVSAKSTNTETPCVTASRTVPT 434
           +ST+++ +S K      P  T  R  PT
Sbjct: 229 QSTSSEKISKKDQENARPRETKLRNTPT 256


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 493
           C  G   E + HG + C   K CP  T+    +C + ++T   QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDC 493
           C  G   E + HG + C   K CP  T+    +C + ++T   QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,711,017
Number of Sequences: 27780
Number of extensions: 316070
Number of successful extensions: 1153
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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