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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_D11
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr...    36   0.025
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr...    34   0.099
AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical ...    31   0.53 
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr...    31   0.70 
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch...    31   0.70 
M37235-1|AAA28122.1|  273|Caenorhabditis elegans myosin II protein.    31   0.70 
AF014939-5|AAB63928.2|  302|Caenorhabditis elegans Hypothetical ...    31   0.70 
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    29   2.1  
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    29   2.1  
U13070-7|AAC46638.1|  414|Caenorhabditis elegans Rabaptin (rab e...    29   2.1  
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr...    29   2.8  
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch...    29   2.8  
U40029-8|AAA81128.2|  275|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U97191-7|AAB52429.1|  241|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z47075-6|CAA87379.1|  538|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p...    28   6.5  
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p...    28   6.5  
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p...    28   6.5  
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p...    28   6.5  
U22831-14|AAN84802.1|  334|Caenorhabditis elegans G-protein-link...    28   6.5  
U22831-12|AAL65784.1|  614|Caenorhabditis elegans G-protein-link...    28   6.5  
U22831-11|AAL65783.1|  627|Caenorhabditis elegans G-protein-link...    28   6.5  
U22831-10|AAM98012.1|  667|Caenorhabditis elegans G-protein-link...    28   6.5  
AY053365-1|AAL15153.1|  627|Caenorhabditis elegans G-protein-lin...    28   6.5  
AY053364-1|AAL15152.1|  664|Caenorhabditis elegans G-protein-lin...    28   6.5  
AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical...    28   6.5  
AF500111-1|AAM27196.1|  538|Caenorhabditis elegans poly ADP-ribo...    28   6.5  
AF272738-1|AAK94896.1|  614|Caenorhabditis elegans G protein-lin...    28   6.5  
AF016679-3|AAB66160.1|  578|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF016679-2|AAB66159.1|  658|Caenorhabditis elegans Hypothetical ...    28   6.5  
U50197-4|AAA91257.1|  443|Caenorhabditis elegans Intermediate fi...    27   8.6  

>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
           protein C50C3.2 protein.
          Length = 2107

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 16/62 (25%), Positives = 35/62 (56%)
 Frame = +3

Query: 105 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 284
           E PED N EDI +E  +++       S ++ +E   D++ Q+ ++L Q ++   +++ + 
Sbjct: 416 ESPEDMNAEDIEKEIRVIDGITVRCTSVVEQIENIEDELRQKPEQLNQLSVYASKQVNDL 475

Query: 285 NK 290
           N+
Sbjct: 476 NE 477


>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
            F58G4.1 protein.
          Length = 1974

 Score = 33.9 bits (74), Expect = 0.099
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +3

Query: 114  EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 284
            E+D    + +    LESTLDEL   L+  +R   D  +Q ++ ++  + I QE+ EE
Sbjct: 1023 EEDKVNHLNKTKAKLESTLDELEDTLEREKRGRQDCEKQRRK-VEGELKIAQELIEE 1078


>AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.7 protein.
          Length = 433

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = +3

Query: 132 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
           D+    E+L+     L +  + LE   DD+H+++  L  SN  + +   +  + +SNS+
Sbjct: 149 DLARNVEILQEENSNLTAKNEKLEETVDDLHEKVANLETSNKELTEINVDNERKISNSS 207


>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 156  LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
            LE+ ++EL  ALD   + N+D  + ++  L     ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678


>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 156  LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
            LE+ ++EL  ALD   + N+D  + ++  L     ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678


>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
            protein.
          Length = 1947

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 156  LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
            LE+ ++EL  ALD   + N+D  + ++  L     ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678


>M37235-1|AAA28122.1|  273|Caenorhabditis elegans myosin II protein.
          Length = 273

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 156 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
           LE+ ++EL  ALD   + N+D  + ++  L     ++Q + EE K
Sbjct: 134 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 178


>AF014939-5|AAB63928.2|  302|Caenorhabditis elegans Hypothetical
           protein ZC132.6 protein.
          Length = 302

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +3

Query: 129 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMRE 281
           E +  +Y   EST++ LN  L   + KND I  Q KEL ++ + I  ++R+
Sbjct: 144 EALKNKYTNSESTINSLNEKLLKEKSKNDSIQAQ-KELYENLVIIIDQLRQ 193


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +3

Query: 117  DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 239
            ++ NE + +    LES L ++   L+ ++ +N+D+ +Q K+
Sbjct: 915  EERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKK 955



 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = +3

Query: 114  EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
            E    E+     + LES +++L  ALD   R   D  + +K+ +++   ++ ++ EE +
Sbjct: 1617 ETKQKEEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQR 1675


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +3

Query: 117  DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 239
            ++ NE + +    LES L ++   L+ ++ +N+D+ +Q K+
Sbjct: 915  EERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKK 955



 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = +3

Query: 114  EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
            E    E+     + LES +++L  ALD   R   D  + +K+ +++   ++ ++ EE +
Sbjct: 1617 ETKQKEEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQR 1675


>U13070-7|AAC46638.1|  414|Caenorhabditis elegans Rabaptin (rab
           effector) protein 5 protein.
          Length = 414

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +3

Query: 156 LESTLDELNSALDFLERKNDD---IHQQLKELLQSNIAIRQEMREENKDV 296
           +E   D+LN A D L++ +DD   + ++ K+LL S     QE+R E  D+
Sbjct: 125 IEVFTDQLNLARDKLQQADDDFVTLGKKYKKLLGSTRKSAQELRSEKIDM 174


>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
            protein F11C3.3 protein.
          Length = 1963

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 114  EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 287
            E+D      +    LE TLD+L  +L+  +R   D+ +Q K  ++  + I QE  +E+
Sbjct: 1022 EEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQENIDES 1078


>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
            F11C3.3 protein.
          Length = 1963

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 114  EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 287
            E+D      +    LE TLD+L  +L+  +R   D+ +Q K  ++  + I QE  +E+
Sbjct: 1022 EEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQENIDES 1078


>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
            protein.
          Length = 1966

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 114  EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 287
            E+D      +    LE TLD+L  +L+  +R   D+ +Q K  ++  + I QE  +E+
Sbjct: 1025 EEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQENIDES 1081


>U40029-8|AAA81128.2|  275|Caenorhabditis elegans Hypothetical
           protein F10G7.3 protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 105 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDD 218
           E  +DD  E   EE +L ES  + L +ALD  E+K  D
Sbjct: 191 EEEDDDEMEANAEEVDLNESFNERLANALDGAEQKGAD 228


>U97191-7|AAB52429.1|  241|Caenorhabditis elegans Hypothetical
           protein F53F10.1 protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 102 IEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQS 251
           +E  + D NE++  E E L+   +ELN   + +E     I Q L+  +QS
Sbjct: 176 VETTKSDINEELKAENEFLKDQANELNKCREKIETDGKTI-QDLRLRIQS 224


>AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical
           protein Y32B12B.2 protein.
          Length = 789

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +3

Query: 120 DNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 299
           D  ED      + ES  DEL+     LER++D  H++ ++  +  I    E  EE  D  
Sbjct: 627 DEEEDYDNTEIVYESEEDELDGLEAKLERESDRRHKKWEKKNKVMIDSDDEEEEEENDDD 686

Query: 300 NSN 308
             N
Sbjct: 687 KEN 689


>Z47075-6|CAA87379.1|  538|Caenorhabditis elegans Hypothetical
           protein E02H1.4 protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +3

Query: 108 PPEDDNNEDITEEYELLESTLDELNSALDFLERK----NDDIHQQLKELLQSNI 257
           PP+ D++  I  E ELL++    + ++L+  + K    + DI+Q+L E L  ++
Sbjct: 255 PPKIDSHAKIQAERELLDALKGSIEASLELKDLKKTASSKDIYQRLYERLPCHL 308


>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
           protein F35D11.11a protein.
          Length = 1840

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +3

Query: 141 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
           E+YE L+  L+E+N      ER+  D+   L +L  +   +  E++++   V + N
Sbjct: 704 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 759


>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
           protein F35D11.11c protein.
          Length = 1898

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +3

Query: 141 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
           E+YE L+  L+E+N      ER+  D+   L +L  +   +  E++++   V + N
Sbjct: 704 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 759


>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
           protein F35D11.11d protein.
          Length = 1671

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +3

Query: 141 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
           E+YE L+  L+E+N      ER+  D+   L +L  +   +  E++++   V + N
Sbjct: 464 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 519


>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
           protein F35D11.11b protein.
          Length = 1911

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +3

Query: 141 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
           E+YE L+  L+E+N      ER+  D+   L +L  +   +  E++++   V + N
Sbjct: 704 EKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLN 759


>U22831-14|AAN84802.1|  334|Caenorhabditis elegans G-protein-linked
           acetylcholinereceptor protein 2, isoform e protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 637 YYVLLTHFFFCEQCSTKCYFSFLLT*ICNL*HLNGANKLNNYSY 506
           +YVL T + FCE C     F+ L T    L ++N  + LN + Y
Sbjct: 271 FYVLATIYGFCETCKASPSFNTLYTISYYLCYMN--SPLNPFCY 312


>U22831-12|AAL65784.1|  614|Caenorhabditis elegans G-protein-linked
           acetylcholinereceptor protein 2, isoform b protein.
          Length = 614

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 637 YYVLLTHFFFCEQCSTKCYFSFLLT*ICNL*HLNGANKLNNYSY 506
           +YVL T + FCE C     F+ L T    L ++N  + LN + Y
Sbjct: 551 FYVLATIYGFCETCKASPSFNTLYTISYYLCYMN--SPLNPFCY 592


>U22831-11|AAL65783.1|  627|Caenorhabditis elegans G-protein-linked
           acetylcholinereceptor protein 2, isoform a protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 637 YYVLLTHFFFCEQCSTKCYFSFLLT*ICNL*HLNGANKLNNYSY 506
           +YVL T + FCE C     F+ L T    L ++N  + LN + Y
Sbjct: 564 FYVLATIYGFCETCKASPSFNTLYTISYYLCYMN--SPLNPFCY 605


>U22831-10|AAM98012.1|  667|Caenorhabditis elegans G-protein-linked
           acetylcholinereceptor protein 2, isoform c protein.
          Length = 667

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 637 YYVLLTHFFFCEQCSTKCYFSFLLT*ICNL*HLNGANKLNNYSY 506
           +YVL T + FCE C     F+ L T    L ++N  + LN + Y
Sbjct: 604 FYVLATIYGFCETCKASPSFNTLYTISYYLCYMN--SPLNPFCY 645


>AY053365-1|AAL15153.1|  627|Caenorhabditis elegans G-protein-linked
           acetylcholinereceptor GAR-2b protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 637 YYVLLTHFFFCEQCSTKCYFSFLLT*ICNL*HLNGANKLNNYSY 506
           +YVL T + FCE C     F+ L T    L ++N  + LN + Y
Sbjct: 564 FYVLATIYGFCETCKASPSFNTLYTISYYLCYMN--SPLNPFCY 605


>AY053364-1|AAL15152.1|  664|Caenorhabditis elegans G-protein-linked
           acetylcholinereceptor GAR-2a protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 637 YYVLLTHFFFCEQCSTKCYFSFLLT*ICNL*HLNGANKLNNYSY 506
           +YVL T + FCE C     F+ L T    L ++N  + LN + Y
Sbjct: 601 FYVLATIYGFCETCKASPSFNTLYTISYYLCYMN--SPLNPFCY 642


>AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical
           protein Y54G11A.14 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/57 (26%), Positives = 33/57 (57%)
 Frame = +3

Query: 114 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 284
           EDD+N+D  ++ E  E   +E + A D  E ++D+ ++++KE  +    + + ++ E
Sbjct: 49  EDDDNDDDEDDDEEEEDEDEEEDEAED--EAEDDEENEEVKEEKEDEEVVEERVKVE 103


>AF500111-1|AAM27196.1|  538|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-2 protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +3

Query: 108 PPEDDNNEDITEEYELLESTLDELNSALDFLERK----NDDIHQQLKELLQSNI 257
           PP+ D++  I  E ELL++    + ++L+  + K    + DI+Q+L E L  ++
Sbjct: 255 PPKIDSHAKIQAERELLDALKGSIEASLELKDLKKTASSKDIYQRLYERLPCHL 308


>AF272738-1|AAK94896.1|  614|Caenorhabditis elegans G protein-linked
           acetylcholinereceptor GAR-2c protein.
          Length = 614

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 637 YYVLLTHFFFCEQCSTKCYFSFLLT*ICNL*HLNGANKLNNYSY 506
           +YVL T + FCE C     F+ L T    L ++N  + LN + Y
Sbjct: 551 FYVLATIYGFCETCKASPSFNTLYTISYYLCYMN--SPLNPFCY 592


>AF016679-3|AAB66160.1|  578|Caenorhabditis elegans Hypothetical
           protein T28C12.4b protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 153 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
           LL  T  E+NSA+D L RKN     +++ + +        +R ++K
Sbjct: 347 LLRGTEKEINSAIDVLSRKNRLSRSKIEAMTEKVYGDSPALRADSK 392


>AF016679-2|AAB66159.1|  658|Caenorhabditis elegans Hypothetical
           protein T28C12.4a protein.
          Length = 658

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 153 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
           LL  T  E+NSA+D L RKN     +++ + +        +R ++K
Sbjct: 427 LLRGTEKEINSAIDVLSRKNRLSRSKIEAMTEKVYGDSPALRADSK 472


>U50197-4|AAA91257.1|  443|Caenorhabditis elegans Intermediate
           filament, d protein 2 protein.
          Length = 443

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +3

Query: 117 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELL-----QSNIAIRQEMRE 281
           ++    +  E   L S +  +++  D    K+    Q+L + L     Q +IAIR+E+ +
Sbjct: 183 EEEKSRVHSEISRLRSDIKRVHALRDKERSKHSSSSQELLKRLNGCISQHDIAIREEISK 242

Query: 282 ENKDVSNSN 308
             +D +N N
Sbjct: 243 ARRDTTNKN 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,883,289
Number of Sequences: 27780
Number of extensions: 224035
Number of successful extensions: 947
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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