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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_B19
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   148   3e-36
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical...    29   2.2  
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical...    29   2.2  
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ...    29   2.2  
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical...    29   2.2  
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical...    29   2.2  
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like pro...    28   5.0  
AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z93382-9|CAB07615.2|  462|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell l...    27   8.8  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    27   8.8  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    27   8.8  
AF348168-1|AAK37546.1|  462|Caenorhabditis elegans TRF-1 protein.      27   8.8  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    27   8.8  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  148 bits (359), Expect = 3e-36
 Identities = 70/107 (65%), Positives = 84/107 (78%)
 Frame = +2

Query: 332 RINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKF 511
           RINKMLSCAGADRLQTGMRGA+GKPQG VARV IG  + S+R  +      IEA RRAKF
Sbjct: 98  RINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKF 157

Query: 512 KFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHG 652
           KFPGRQ I  S+KWGFTK++R+++E++R EGRL +DG  VQ + EHG
Sbjct: 158 KFPGRQIIVSSRKWGFTKWDREDYERMRAEGRLRSDGVGVQLQREHG 204



 Score =  145 bits (351), Expect = 3e-35
 Identities = 68/105 (64%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
 Frame = +3

Query: 39  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 218
           MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E L
Sbjct: 1   MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60

Query: 219 SSEALEAGRICCNKYLXKELRKGSVPYPHETSPF--PRLSASIKC 347
           SSEALEA RIC NKY+ K   K          PF   R++  + C
Sbjct: 61  SSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSC 105


>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6c protein.
          Length = 1245

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -1

Query: 468  LSLERTDMMGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILLMRINVERVKSHADME 292
            L++E TD++G P RT+A +     N+  IP         D++         V  HA+ME
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020


>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6a protein.
          Length = 1247

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -1

Query: 468  LSLERTDMMGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILLMRINVERVKSHADME 292
            L++E TD++G P RT+A +     N+  IP         D++         V  HA+ME
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020


>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6b protein.
          Length = 1245

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -1

Query: 468  LSLERTDMMGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILLMRINVERVKSHADME 292
            L++E TD++G P RT+A +     N+  IP         D++         V  HA+ME
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020


>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6c protein.
          Length = 1245

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -1

Query: 468  LSLERTDMMGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILLMRINVERVKSHADME 292
            L++E TD++G P RT+A +     N+  IP         D++         V  HA+ME
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020


>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6a protein.
          Length = 1247

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -1

Query: 468  LSLERTDMMGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILLMRINVERVKSHADME 292
            L++E TD++G P RT+A +     N+  IP         D++         V  HA+ME
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020


>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6b protein.
          Length = 1245

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -1

Query: 468  LSLERTDMMGCPMRTRATVP*GLPNAPRIPVWSLSAPAHDNILLMRINVERVKSHADME 292
            L++E TD++G P RT+A +     N+  IP         D++         V  HA+ME
Sbjct: 962  LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020


>Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical
           protein F07A11.6d protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -3

Query: 475 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 353
           +P VT A   + LSN  T  ST  LA   T  +L P+S  A
Sbjct: 46  VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86


>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 386 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE--ALRRAKFKFPGRQK 532
           R   GKP   +A+   G+ I  + + D W  + +    +   K +F G QK
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPVPEGTVNAIKARFHGSQK 278


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 405 GLPNAPRIPVWSLSAPA 355
           G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248


>AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like
           protein 2 protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 99  RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 245
           R C  +   K  I D  K+ A ++     + +++ EYEQ++S   +AG+
Sbjct: 93  RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141


>AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical
           protein C29F9.4 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 557 FTKYERDEFEKLREEGRLANDGCIVQYR 640
           F K +RDEFE++R +  LA +  I  Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163


>Z93382-9|CAB07615.2|  462|Caenorhabditis elegans Hypothetical
           protein F45G2.6 protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 452 RT*WAVQCEHVLQYPEACQTHHASQSGAYQLQRMITFY*CG*TWKG 315
           RT     C+ ++Q PE CQ   A Q     L  + TF   G  W G
Sbjct: 47  RTPGCAACQTIIQ-PELCQHDRAKQKQILALPVVCTFESSGCPWDG 91


>U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell
           lineage protein 32 protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 426 FALDSPSCPCALVTGGRHRSSRLCAVPSSSSPDVKR 533
           F+LDSP+ P +L  GG     + C    + SP + R
Sbjct: 36  FSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLR 71


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 161 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 60
           RS +  IE   +D+ +  TP +P+   +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 161 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 60
           RS +  IE   +D+ +  TP +P+   +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628


>AF348168-1|AAK37546.1|  462|Caenorhabditis elegans TRF-1 protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 452 RT*WAVQCEHVLQYPEACQTHHASQSGAYQLQRMITFY*CG*TWKG 315
           RT     C+ ++Q PE CQ   A Q     L  + TF   G  W G
Sbjct: 47  RTPGCAACQTIIQ-PELCQHDRAKQKQILALPVVCTFESSGCPWDG 91


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 161 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 60
           RS +  IE   +D+ +  TP +P+   +F+F VPVA
Sbjct: 176 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,769,872
Number of Sequences: 27780
Number of extensions: 378626
Number of successful extensions: 1063
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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