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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a16r
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    33   0.30 
AL023844-6|CAA19532.1|  551|Caenorhabditis elegans Hypothetical ...    30   1.6  
U58762-6|AAG01563.2|  208|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to tran...    30   2.1  
U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to tran...    30   2.1  
AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z81544-7|CAB04432.2|  551|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U80451-7|AAB37841.3|  277|Caenorhabditis elegans Collagen protei...    28   6.4  
U28928-12|AAL16320.2|  597|Caenorhabditis elegans Hypothetical p...    28   6.4  
U23169-3|AAV58882.1|  284|Caenorhabditis elegans Regulator of g ...    28   6.4  
U23169-2|AAM98050.1|  290|Caenorhabditis elegans Regulator of g ...    28   6.4  
U23169-1|AAL02450.1|  363|Caenorhabditis elegans Regulator of g ...    28   6.4  
U18384-1|AAA62504.1|  293|Caenorhabditis elegans collagen protein.     28   6.4  
Z46937-5|CAA87057.1|  376|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z46937-2|CAB60996.1|  444|Caenorhabditis elegans Hypothetical pr...    28   8.4  
U27124-1|AAA73482.1|  376|Caenorhabditis elegans MPK-1 protein.        28   8.4  
U03879-1|AAA18956.1|  444|Caenorhabditis elegans Sur-1 MAP kinas...    28   8.4  

>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 32/122 (26%), Positives = 41/122 (33%)
 Frame = -1

Query: 402 ETYAAPRYDWRFGDADVRHRVAGPHRYALAHIGHDHDEGPLCLSLELMYLHHASRISI*Q 223
           E + AP +    G+    H   G H +A AH GH  + G         + HH S  S   
Sbjct: 508 EHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHG-------THHGHHGSHHSPAH 560

Query: 222 TD*HGELLH*QHEVR*RNDLQKRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQR 43
              HGE  H                H  H +  GH   GH     H    GH G+  +  
Sbjct: 561 HGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGH---GHHAPAHH----GHHGEHGVHH 613

Query: 42  RH 37
            H
Sbjct: 614 GH 615



 Score = 31.1 bits (67), Expect = 0.90
 Identities = 31/123 (25%), Positives = 38/123 (30%), Gaps = 8/123 (6%)
 Frame = -1

Query: 366 GDADVRHRVAGPHRYALAHIGHDHDEGPLCLSLELMYLHHASRISI*QTD*HGELLH*QH 187
           G+    H   G H +A AH GH    G         + HH+        + H    H  H
Sbjct: 420 GEHGTHHGHHGEHHHAPAHHGHHESHG---------HGHHSPAHHGHHGEHHHAPAHHGH 470

Query: 186 EVR*RNDLQKRPRHVEHQQDRGHLGD-------GHDEGRSHLPG-LGHAGQEDLQRRHDD 31
                +       H EH    GH G        GH     H P   GH G+      H  
Sbjct: 471 HGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHG 530

Query: 30  EQH 22
           E H
Sbjct: 531 EHH 533



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 29/112 (25%), Positives = 33/112 (29%), Gaps = 2/112 (1%)
 Frame = +3

Query: 66  HVRVQVGEIVLHHDHLRGVHGLAGVRHA--EVFSVDHYVSELHVVSEEARHVNRSVKWIS 239
           H     GE   HH H  G H  A   H   E     H+    H    E  H         
Sbjct: 414 HSPAHHGEHGTHHGH-HGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHG 472

Query: 240 ERHGGDT*APATSTTVLHHGHVQCGQEHTGADRRHDDVHLHLQTSNRTEGQH 395
           E H              HHGH   G  H+ A   H   H H    +   G+H
Sbjct: 473 EHHHAPAHHGHHGEHGTHHGHH--GSHHSPAHHGHHGEHHHAPAHHGHHGEH 522



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 28/104 (26%), Positives = 33/104 (31%), Gaps = 3/104 (2%)
 Frame = +3

Query: 99  HHDHLRGVHGLAGVRHAEVFSVDHYVSELHVVSEEARHVNRSVKWISERHGGDT*-APAT 275
           HH H  G HG     H    S  H+          A H +         H G+   APA 
Sbjct: 480 HHGH-HGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAH 538

Query: 276 STTVLHHG--HVQCGQEHTGADRRHDDVHLHLQTSNRTEGQHKS 401
                 HG  H   G  H+ A   H   H H    +   G H S
Sbjct: 539 HGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGS 582



 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -1

Query: 153 PRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQH 22
           P H EH + +      H EG  H     H  +  +  RH  E H
Sbjct: 368 PAHHEHHEHKDGAHHEHKEGEHH-EHAAHHDEHGVHHRHHGEHH 410


>AL023844-6|CAA19532.1|  551|Caenorhabditis elegans Hypothetical
           protein Y48A6B.8 protein.
          Length = 551

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 675 CGPHLPGSQVRLHGQAHERQRQTPRHVRAGQLYVQTGQRKEH 550
           C  HL   QVR   + H+R   +P  V    +   TGQR EH
Sbjct: 500 CEHHLKWGQVRKFREQHQRMETSPEEV----IRFATGQRNEH 537


>U58762-6|AAG01563.2|  208|Caenorhabditis elegans Hypothetical
           protein T27F7.1 protein.
          Length = 208

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 557 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKD 435
           K+T V  SM     +PE + T R M +EMM  G  + M+++
Sbjct: 104 KSTEVMKSMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEE 144


>U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform a
           protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = -1

Query: 165 LQKRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHD 19
           + K   +  H    GH  D +D G SH  G    G +     HD  +HD
Sbjct: 348 IHKSEGNHSHDNGHGHSHDHNDHGHSH--GHDDHGHDSHGHSHDHNEHD 394


>U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform b
           protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = -1

Query: 165 LQKRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHD 19
           + K   +  H    GH  D +D G SH  G    G +     HD  +HD
Sbjct: 366 IHKSEGNHSHDNGHGHSHDHNDHGHSH--GHDDHGHDSHGHSHDHNEHD 412


>AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical
           protein Y32H12A.7 protein.
          Length = 600

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 248 WWRYMSSSDKHNGPSSWSCPMWARAYR 328
           WWRY+  S +H+GP+      WA   R
Sbjct: 120 WWRYLLWSLQHSGPTFIKLGQWASTRR 146


>Z81544-7|CAB04432.2|  551|Caenorhabditis elegans Hypothetical
           protein F49C5.3 protein.
          Length = 551

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 675 CGPHLPGSQVRLHGQAHERQRQTPRHVRAGQLYVQTGQRKEH 550
           C  HL   QVR   + H+R   +P  +    +   TGQR EH
Sbjct: 500 CEHHLKWGQVRKFREQHQRMETSPEEM----IRFATGQRNEH 537


>U80451-7|AAB37841.3|  277|Caenorhabditis elegans Collagen protein
           17 protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = -1

Query: 162 QKRPRHVEHQ--QDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDE 16
           Q+   H +HQ  QD+  L D  +      P   H G +D Q   + + H +
Sbjct: 124 QEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQD 174


>U28928-12|AAL16320.2|  597|Caenorhabditis elegans Hypothetical
           protein C44B7.2a protein.
          Length = 597

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = -1

Query: 657 GSQVRLHGQAHERQRQTPRHVRAGQLYVQTGQRKEHHRP*LHGYARIYPRVPFDSSCNGK 478
           G   R  G      R +P     G+ Y  +G R+E +R  LHG  R  P  P      G 
Sbjct: 529 GDGERKEGFIQPAHRPSPSFRGRGRGYGDSGFRRESYRGGLHGSDRYGPYPPRGGGFRGG 588

Query: 477 R 475
           R
Sbjct: 589 R 589


>U23169-3|AAV58882.1|  284|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform c protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 557 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 465
           +N +   ++DM+ F P     RR++E++  P
Sbjct: 104 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 134


>U23169-2|AAM98050.1|  290|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform b protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 557 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 465
           +N +   ++DM+ F P     RR++E++  P
Sbjct: 110 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 140


>U23169-1|AAL02450.1|  363|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform a protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 557 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 465
           +N +   ++DM+ F P     RR++E++  P
Sbjct: 183 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 213


>U18384-1|AAA62504.1|  293|Caenorhabditis elegans collagen protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = -1

Query: 162 QKRPRHVEHQ--QDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDE 16
           Q+   H +HQ  QD+  L D  +      P   H G +D Q   + + H +
Sbjct: 124 QEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQD 174


>Z46937-5|CAA87057.1|  376|Caenorhabditis elegans Hypothetical
           protein F43C1.2a protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 530 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 429
           D  GF+ EY++TR     E+M +  G T   D W
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 215


>Z46937-2|CAB60996.1|  444|Caenorhabditis elegans Hypothetical
           protein F43C1.2b protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 530 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 429
           D  GF+ EY++TR     E+M +  G T   D W
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 283


>U27124-1|AAA73482.1|  376|Caenorhabditis elegans MPK-1 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 530 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 429
           D  GF+ EY++TR     E+M +  G T   D W
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 215


>U03879-1|AAA18956.1|  444|Caenorhabditis elegans Sur-1 MAP kinase
           protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 530 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 429
           D  GF+ EY++TR     E+M +  G T   D W
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,904,333
Number of Sequences: 27780
Number of extensions: 408123
Number of successful extensions: 1444
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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