Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B03
(908 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53334-1|AAA96168.1| 508|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical ... 29 6.1
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 29 6.1
AC006684-7|AAF39961.1| 219|Caenorhabditis elegans Hypothetical ... 29 6.1
AC006684-4|AAF39966.1| 181|Caenorhabditis elegans Hypothetical ... 29 6.1
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U53334-1|AAA96168.1| 508|Caenorhabditis elegans Hypothetical
protein R105.1 protein.
Length = 508
Score = 35.9 bits (79), Expect = 0.040
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 484 NRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPE 633
N PY WR++ W P S ++ V F L + + N+ +C RP+
Sbjct: 176 NNSPYGYWRQITWCPKGSVIIAIQEK--VDFEKLDNAGITNLAAKCGRPQ 223
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 172 MSEENKSILHELYVYSEWKPEPEYIQKPDNLLL----PENISSLWKWLKFFGPKKNL 330
MSE + +I E + S W P P+ + PD L EN S +W LK P +L
Sbjct: 229 MSETSDTI-REAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMDL 284
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 172 MSEENKSILHELYVYSEWKPEPEYIQKPDNLLL----PENISSLWKWLKFFGPKKNL 330
MSE + +I E + S W P P+ + PD L EN S +W LK P +L
Sbjct: 229 MSETSDTI-REAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMDL 284
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 172 MSEENKSILHELYVYSEWKPEPEYIQKPDNLLL----PENISSLWKWLKFFGPKKNL 330
MSE + +I E + S W P P+ + PD L EN S +W LK P +L
Sbjct: 266 MSETSDTI-REAFTESAWIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPGMDL 321
>AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical
protein C09E8.1b protein.
Length = 756
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 475 TTVNRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFN 606
+ +++DP+ W L S S +++ Y GF L S L N
Sbjct: 252 SAISKDPFDFWADLRGSYRTSILIVDYSTAFTGFVLLATSRLRN 295
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 475 TTVNRDPYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFN 606
+ +++DP+ W L S S +++ Y GF L S L N
Sbjct: 252 SAISKDPFDFWADLRGSYRTSILIVDYSTAFTGFVLLATSRLRN 295
>AC006684-7|AAF39961.1| 219|Caenorhabditis elegans Hypothetical
protein T02H6.4 protein.
Length = 219
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 493 PYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPE 633
P+ WR++ W P+ + ++ G D + + N +C RPE
Sbjct: 81 PFGHWREIQWCPNGTVIIGIQTKSDRGRID--KAGITNFAAKCGRPE 125
>AC006684-4|AAF39966.1| 181|Caenorhabditis elegans Hypothetical
protein T02H6.7 protein.
Length = 181
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 493 PYSQWRKLVWSPDCSFVVLAYGNGVVGFFDLTASNLFNIPIECSRPE 633
P+ WR++ W P+ + ++ G D + + N +C RPE
Sbjct: 81 PFGHWREIQWCPNGTVIIGIQTKSDRGRID--KAGITNFAAKCGRPE 125
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 334 DSVTAHKENHQKWHIALGDEGKVIAVLTDNILEIRTKRSDYATIAARTTVNRDPYSQW 507
D AH+ N +W +A G+E + A L IR K D + +++T + D +++
Sbjct: 23 DDYCAHEFNVYRWLVAYGNEEEEAAKALKRHLNIR-KTIDLNSYSSKTELEEDELNKY 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,913,169
Number of Sequences: 27780
Number of extensions: 432935
Number of successful extensions: 1022
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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