SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30038X
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna b...    31   0.36 
U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical pr...    30   0.62 
Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    30   0.82 
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    30   0.82 
Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z77657-1|CAB01144.1|  130|Caenorhabditis elegans Hypothetical pr...    28   2.5  
U88180-1|AAB42294.1|  203|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U70851-7|AAB09130.3|  640|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    28   3.3  
AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z79695-7|CAO79774.1|  291|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z79695-6|CAB01968.3|  293|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z69634-6|CAD01081.2|  490|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote...    27   4.4  
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote...    27   4.4  
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote...    27   4.4  
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AL032652-6|CAA21710.2|  752|Caenorhabditis elegans Hypothetical ...    27   5.8  
Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ...    27   7.7  
AL032652-5|CAB63399.1|  579|Caenorhabditis elegans Hypothetical ...    27   7.7  
AL031629-3|CAA20976.1|  555|Caenorhabditis elegans Hypothetical ...    27   7.7  

>U00052-10|AAK21429.2|  289|Caenorhabditis elegans Rnp (rrm rna
           binding domain) containingprotein 5 protein.
          Length = 289

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 21/74 (28%), Positives = 36/74 (48%)
 Frame = +1

Query: 190 DRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRA 369
           + + R R   +SSS  + S  +  +S  + S++ ++SG R R  S   + +RP AR  R+
Sbjct: 6   ETKKRARSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSG-RSRSRSPRRRDTRPPARGGRS 64

Query: 370 EEEKRLAQKKKGRR 411
               R     +G R
Sbjct: 65  RSPIRRGSPPRGAR 78


>U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical
           protein C10G11.9 protein.
          Length = 203

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +1

Query: 196 RSRVREIQNSSS-VKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAE 372
           RSR  +   S S  +TRSG    +  R+ S   +    RRR SS A  R   +A+ + A+
Sbjct: 125 RSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARGRRASTAKKTPAK 184

Query: 373 EEKRLAQKKKGRR---RKG 420
              R   ++K +R   RKG
Sbjct: 185 RRSRSRSQQKVKRSMSRKG 203


>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 29.9 bits (64), Expect = 0.82
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = +1

Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
           RSR R +  S S  +R+GR         S + + S  R R  SN   RSR S R   A  
Sbjct: 185 RSRSRSVSRSKSPASRNGR--------VSRHRSRSQNRSRSRSNTRSRSRSSGRSGSAHS 236

Query: 376 EK 381
            K
Sbjct: 237 RK 238


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 0.82
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = +1

Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
           RSR R +  S S  +R+GR         S + + S  R R  SN   RSR S R   A  
Sbjct: 185 RSRSRSVSRSKSPASRNGR--------VSRHRSRSQNRSRSRSNTRSRSRSSGRSGSAHS 236

Query: 376 EK 381
            K
Sbjct: 237 RK 238


>Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G2.8 protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +1

Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
           RS  R +  S+S  + S R+         T  + S  R R  S +  RSR S  +SR+  
Sbjct: 88  RSSRRSVVRSASRGSVSRRSSSRGSVYGRTGRSRSSKRSRSRSRSRSRSR-SRSYSRSRS 146

Query: 376 EKRLAQKKKGRRR 414
             R + +++ RRR
Sbjct: 147 GSRRSSRRRSRRR 159


>Z77657-1|CAB01144.1|  130|Caenorhabditis elegans Hypothetical
           protein F08H9.2 protein.
          Length = 130

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +1

Query: 226 SSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQK 396
           S  ++RS     +  R+TS+  + S   RR+S    KR RP++   ++ EEK  A+K
Sbjct: 67  SRSRSRSRSRSRSKSRSTSSRRSRSRSARRVS---FKRGRPASFAMKSPEEKTAAKK 120


>U88180-1|AAB42294.1|  203|Caenorhabditis elegans Hypothetical
           protein T27A3.4 protein.
          Length = 203

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +1

Query: 271 RNTSTNGANSGP--RRRMSSNALKRSRPSARF-SRAEEEKRLAQKKKGRRR 414
           R +S+ G+  G   R R S  +  RSRP  R  SR+    R   ++  RRR
Sbjct: 111 RRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRR 161


>U70851-7|AAB09130.3|  640|Caenorhabditis elegans Hypothetical
           protein M02B7.5 protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 229 SVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNAL 333
           S+K  +G        N+STNG N+   RR+S N+L
Sbjct: 594 SMKLSNGSNSSAGSSNSSTNGVNNSSFRRLSFNSL 628


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            R+   S    RSR  AR SR+ E KR   +   RRR+
Sbjct: 1504 RKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRR 1540


>AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical
           protein C51G7.3 protein.
          Length = 754

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
           R+   S    RSR  AR SR+ E KR   +   RRR+
Sbjct: 129 RKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRR 165


>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
            ZK1151.1h protein.
          Length = 3424

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1431 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1467



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1417 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1460


>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
            ZK1151.1a protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472


>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
            ZK1151.1e protein.
          Length = 3323

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1330 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1366



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1316 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1359


>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
            ZK1151.1d protein.
          Length = 3405

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1412 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1448



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1398 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1441


>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
            ZK1151.1h protein.
          Length = 3424

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1431 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1467



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1417 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1460


>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
            ZK1151.1a protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472


>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
            ZK1151.1e protein.
          Length = 3323

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1330 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1366



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1316 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1359


>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
            ZK1151.1d protein.
          Length = 3405

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1412 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1448



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1398 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1441


>Z79695-7|CAO79774.1|  291|Caenorhabditis elegans Hypothetical
           protein F27D4.2b protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 271 RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEE 378
           RN ST+GA S  R  ++++A    RP+   +  EEE
Sbjct: 224 RNPSTSGAASRTRTPLTTSATNSPRPTTEPTIKEEE 259


>Z79695-6|CAB01968.3|  293|Caenorhabditis elegans Hypothetical
           protein F27D4.2a protein.
          Length = 293

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 271 RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEE 378
           RN ST+GA S  R  ++++A    RP+   +  EEE
Sbjct: 226 RNPSTSGAASRTRTPLTTSATNSPRPTTEPTIKEEE 261


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 310 RRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRR 414
           RR +S    RSR   R SR+ + +R +  ++ RRR
Sbjct: 430 RRSNSRRRSRSRDRQRRSRSRDRRRYSPDRRERRR 464


>Z69634-6|CAD01081.2|  490|Caenorhabditis elegans Hypothetical
           protein B0001.8 protein.
          Length = 490

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 217 QNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPS-ARFSRAEEEKR 384
           + + S +   GR+  N   NTS    N  P R       + +RPS  R SR+ E +R
Sbjct: 227 ERNRSPRYNDGRSNQNDYGNTSQYSRNGSPDRSRRQIPNEHNRPSNLRRSRSAERRR 283


>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
            protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472


>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
            protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472


>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
            protein.
          Length = 3436

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 307  RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
            RRR + +  +R     R  R EEE+R  ++++ RR+K
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKK 1479



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 292  ANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
            A    RRR      +R     R  R +EE R  ++++ RRR+ E
Sbjct: 1429 AEEAERRRREEEERRRREAEDRKRRQDEEDRRRREEEERRRREE 1472


>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
           protein T01E8.5 protein.
          Length = 1270

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 259 MNS*RNTSTNGANSGPRRRMSSNALKRSRP-SARFSRAEEEKRLAQKKKGRRRK 417
           +N  ++       S  R+R +SN+   SR  S R+ R    +R   ++K RR+K
Sbjct: 123 LNGCQDPPETSQQSTSRKRSASNSRSPSRSHSRRYDRDNGRQRSRSREKKRRKK 176


>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
           protein T01E8.5 protein.
          Length = 1270

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 259 MNS*RNTSTNGANSGPRRRMSSNALKRSRP-SARFSRAEEEKRLAQKKKGRRRK 417
           +N  ++       S  R+R +SN+   SR  S R+ R    +R   ++K RR+K
Sbjct: 123 LNGCQDPPETSQQSTSRKRSASNSRSPSRSHSRRYDRDNGRQRSRSREKKRRKK 176


>AL032652-6|CAA21710.2|  752|Caenorhabditis elegans Hypothetical
           protein Y63D3A.6b protein.
          Length = 752

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 165 KPAPKQESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINE 287
           K  PKQ+ + +  G+G  +F+K+      D ++ LKE   E
Sbjct: 526 KNKPKQKKKKA-QGQGQKKFVKKNAPASPDTEKALKEEAKE 565


>Z66521-8|CAA91394.1|  281|Caenorhabditis elegans Hypothetical
           protein W02B12.2 protein.
          Length = 281

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +1

Query: 208 REIQNSSSVKTRS-GRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFS-RAEEEK 381
           R+++ +   + RS  R+     R+ S   + S P RR S  + +  R S   S +   +K
Sbjct: 177 RKLKCTDETRDRSRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKKRSDK 236

Query: 382 RLAQKKKGRRRKG 420
           R   + K R R G
Sbjct: 237 RARSESKSRSRSG 249


>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y113G7B.12 protein.
          Length = 1042

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +1

Query: 274 NTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
           +T   G N     +   N   + + SA     E E R    ++ RR+ GE
Sbjct: 111 STKQFGTNQNKTSKSDQNKTSKRKSSAHTDEKESENREEWSRRSRRKCGE 160


>AL032652-5|CAB63399.1|  579|Caenorhabditis elegans Hypothetical
           protein Y63D3A.6a protein.
          Length = 579

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +3

Query: 165 KPAPKQESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQ 299
           K  PKQ+ + +  G+G  +F+K+      D ++ LKE     R++
Sbjct: 526 KNKPKQKKKKA-QGQGQKKFVKKNAPASPDTEKALKEEAKVLREE 569


>AL031629-3|CAA20976.1|  555|Caenorhabditis elegans Hypothetical
           protein Y106G6D.3 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 283 TNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
           +N  NS  R+   SN  KRS+ S R S   ++    +KKK R+ K
Sbjct: 38  SNSRNS--RKSSRSNKSKRSQRSKRRSAQRKKSSSRRKKKLRKEK 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,125,742
Number of Sequences: 27780
Number of extensions: 109680
Number of successful extensions: 589
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -