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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0026
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67949-6|AAB07559.2|  214|Caenorhabditis elegans Hypothetical pr...   128   4e-30
U80027-7|AAC48119.2|  312|Caenorhabditis elegans Serpentine rece...    30   1.5  
U41014-3|AAK32948.1|  519|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U39742-5|AAK39199.1|  767|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p...    27   8.1  
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p...    27   8.1  
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p...    27   8.1  
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle...    27   8.1  
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle...    27   8.1  
AF016451-7|AAB66003.2|  312|Caenorhabditis elegans Serpentine re...    27   8.1  

>U67949-6|AAB07559.2|  214|Caenorhabditis elegans Hypothetical
           protein F55A4.1 protein.
          Length = 214

 Score =  128 bits (308), Expect = 4e-30
 Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
 Frame = +2

Query: 5   DGLPLAATMQ--EDEQSACNILEYQNQAKMLFRKLSPQSPMRCSIETGPYLFHYLIENHI 178
           DGL LA +++   D     ++++Y NQAKMLF+KL+  +P + S+E+GP++FHY+I  +I
Sbjct: 11  DGLILATSIEGNNDGSGDSSMVKYSNQAKMLFKKLNG-APAQQSVESGPFVFHYIIVQNI 69

Query: 179 CYLVLCERNYSKRLAFNYLEEIAQESSNSTDTG*TP*LVXXXXXXXXXXXXXXGKQYAEX 358
           C LVLC+RN+ +++AF YL +I QE  N   +      +                Q A+ 
Sbjct: 70  CALVLCDRNFPRKVAFQYLSDIGQEFLNENSS-----RIEQVVRPYHFLEFDKYIQQAKQ 124

Query: 359 XXXXXXXXXXSHLAPQLGDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDAT 538
                     + ++ +L DV RIM+ NI+DV+ RG  L+ L+ +   L  MS+KYR DA 
Sbjct: 125 RYGDTNKHAMNTVSNELQDVTRIMVTNIEDVIHRGEALNILENRASELSGMSKKYRDDAK 184

Query: 539 YLNTKSMLVKVTA--GAVIVLVIVLYF 613
            LN +S + KV A  G   VL ++L F
Sbjct: 185 ALNRRSTIFKVAASIGIAGVLFLMLRF 211


>U80027-7|AAC48119.2|  312|Caenorhabditis elegans Serpentine
           receptor, class t protein63 protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 519 FCDISNRFCVFVSSSDSIAPLCSTSSMFCI-MMRCTSPS 406
           +CD+S  FC F++    I P+ S  + F + ++ CT+ S
Sbjct: 61  YCDVSQSFCHFLTGIFLIFPIISEKAQFFVRIVGCTANS 99


>U41014-3|AAK32948.1|  519|Caenorhabditis elegans Hypothetical
           protein C06G1.1 protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 136 NRPVSLPLFD*K--SHMLFGPV*KKLQ*TTSIQLSRGNSTGIFQQYGHRLNTVTRPY 300
           N P+S  LF+    ++ L GPV    Q  T     RGNS GI +Q   RLN    PY
Sbjct: 218 NTPLSASLFEQYFINYALLGPVEFSSQAITLKH--RGNSFGILRQGRTRLNDFRLPY 272


>U39742-5|AAK39199.1|  767|Caenorhabditis elegans Hypothetical
           protein C25F6.4 protein.
          Length = 767

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 205 VSFTQDQITYVIFNQIMEEIRAGFNGTSHR 116
           V F+QD  T+ +F+QI    R   N TS R
Sbjct: 287 VIFSQDGKTFPLFSQISSSERQSLNNTSRR 316


>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
           protein C01B9.1b protein.
          Length = 1671

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +2

Query: 134 ETGP--YLFHYLIENHICYLVLCERNYSKRLAFNYLEE 241
           ETG   Y FH + ENH   + LC R Y+   +  +  E
Sbjct: 267 ETGEDIYKFHVMDENHDISINLCMREYANLHSITFTRE 304


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
           protein C01B9.1a protein.
          Length = 1601

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +2

Query: 134 ETGP--YLFHYLIENHICYLVLCERNYSKRLAFNYLEE 241
           ETG   Y FH + ENH   + LC R Y+   +  +  E
Sbjct: 197 ETGEDIYKFHVMDENHDISINLCMREYANLHSITFTRE 234


>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
           protein 73, isoform b protein.
          Length = 1638

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
           G+VQ++  Q   DV + G+ + ++DT    + D+S K  K     N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602


>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
           protein 73, isoform f protein.
          Length = 2140

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
           G+VQ++  Q   DV + G+ + ++DT    + D+S K  K     N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602


>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
           protein 73, isoform a protein.
          Length = 2488

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
           G+VQ++  Q   DV + G+ + ++DT    + D+S K  K     N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602


>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine
           nucleotide exchange factorUNC-73B protein.
          Length = 1638

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
           G+VQ++  Q   DV + G+ + ++DT    + D+S K  K     N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602


>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine
           nucleotide exchange factorUNC-73A protein.
          Length = 2488

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 410 GDVQRIMMQNIDDVLQRGAILSELDTKTQNLFDMSQKYRKDATYLNTKSMLVK 568
           G+VQ++  Q   DV + G+ + ++DT    + D+S K  K     N++ +L++
Sbjct: 551 GNVQKLH-QVYQDVTKSGSKICDVDTMHGLMTDLSAKIEKFTKIENSRELLLR 602


>AF016451-7|AAB66003.2|  312|Caenorhabditis elegans Serpentine
           receptor, class t protein64 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 519 FCDISNRFCVFVSSSDSIAPLCSTSSMFCI-MMRCTS 412
           +CD+S  FC F++    I P+ +  + F + ++ CT+
Sbjct: 61  YCDVSQSFCHFLTGIFLIFPVVAEKAQFFVRIIGCTA 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,855,099
Number of Sequences: 27780
Number of extensions: 221854
Number of successful extensions: 706
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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